Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2732 ATGGCTCCATCAGATGTTTGTCCGACCGAGAATGCAGTTAAGGTATTCATAGAGCACTTGGTTGATCCGTTGCTGCCAGCAAAATCATCTGTCCAGGATATTCCCACACCATCCCAGCACAAGTTAGTTGCGAAACAGGTGCGTTCAACTGTCCTACTGTACAACTACTACCACAGGAAACAGCATCCAGAGCTAGCATATCTgccatttaatgaattttgcaAGTTGGCTGTGGTTTTGAGGCCAGCATTATTAGCATATATGCAATTCatgcaaaatttaaatgaagCAGAGCTCACTGATGTGGAGAAGCAGCTGTCATTGACAGAAAAAATGATTATGGATGCATGTGATGTATGTAAACGTTTGGATGCATCAAAGAATATTCCTAATATAGAGGGATGGCCCATTACAAAAGTTGCTATCCTTTTAATTGACAGTAAGAAGGAGAACTGCTTTTTGCTGTTTAGTTCCATTACCAGTGGGGTATGGTCTCTGGTTGAAAAAGGTCTGGACACCTCCAGTCAAAGTTCTGAAGTTACATCAGGAACAAAAcagtacaaaaagaaaagagttgtTAAAAAGGCTACAAAAGATGAACTAAAAGTTGATGAAGATGTATTTCTGCAAGTTGGGTATTCTGCTATAAAGGAAGCCACAGGTATTGATGACACTGATATTATGCTTTTGGAAAGCGACACTGTCTATTCTGAGAGCAAAGAGAAGGCAGCTGCTCGCTTTTATATAATGCAGTGCTCCCGGTTGATCAAAGAAGAAGTTAGTCAAGTTCCTCTCAAAGATCTAATTACAAGCTTGCAGGGTCCTTTGATCAGTAAGAGTTCTAGAAGTTGGACAATCACTCCAGTAATCGATTACTTCCATGTGCTTCCATACTCTGAAATAATCTCAAAGTGGATTTCTAGAGAAGCATTCTCAAATCGTTTGCAAGATTCAAGGGTAACCGAGAAAAATATAGAGGTGGACACCCCTGAAGTAACAGACTTCTATGTAAATAAGGACACATTTACGGCTCTTGATAGTAAGCCAAACAGTAATAATATTGATTCACCGAAGCAGAAAGAGAACAACGGAAGTTGTACACCTACATTATCTGATTCTATCAATGAGCCCATGGAAATGGATGTGAATgaatattcaattttcaaatctcagaacaaagaaaaatgccAGAATATTATTGCCAATACTGTACAAGTTGGTGAAGATCAAGATAAAAACAATCTATCTGTGAAGTATAACTCTAATGGCTCATCAAGTGCTATTAAGGCTCTAAAGGTTGATTCAACAAGGATGCTCATTGCTGAAGGTGGAATCAACAATCTTGCTTCTTTGCACAATATTTATGCCAATATGCCCAATACCTCATCTGAAAAAGGCATACTAGATTACAGTATTCAGACCACAAATCATTCTAACTCAGATCTAGAGAAGCTCCAAATTCTTTCAGATTCGAAAAAGATGTTGTCTCAAACTGCCCTAGCTGCTTTGATACGAAAGAGGAATGAATTGGCCCTTCAGCAGCGCAAGATAGAGGATGAGATTGCTGTTTGCGATAAAAAAATTCAGAGATTGTTAACTGAAGGGGAAGATgactttaaattaaagattgaATCAATTATAGAAGGCTGCAACGATACGTGGGTAAGGAATCAAGAAAGGACGTGTGAACAACAAAGCTTACCTCTTAAGAGGAAAAAATTGTCAGAGGCTGTCATTACCACACAAAGTCCATGCCAGGAACTAGACGATGTATGTCGTGCAAACAATTGGGTCCTACCAACTTATCATCTATCCCATTCAGATGGTGGATTCAAAGCCAATGTAACTGTTAAAGGAGTGGAGTTTCAGTGTTCATTTGAGGGTAACGTGGGTTCCAATCCTCCTGAAGCAAGAGAATCAGCTGCAGCTCAGATGTTGACCAACTTAAGAAGCATGGCAAAATTAGCCCAGTGA 1974 0.3759 MAPSDVCPTENAVKVFIEHLVDPLLPAKSSVQDIPTPSQHKLVAKQVRSTVLLYNYYHRKQHPELAYLPFNEFCKLAVVLRPALLAYMQFMQNLNEAELTDVEKQLSLTEKMIMDACDVCKRLDASKNIPNIEGWPITKVAILLIDSKKENCFLLFSSITSGVWSLVEKGLDTSSQSSEVTSGTKQYKKKRVVKKATKDELKVDEDVFLQVGYSAIKEATGIDDTDIMLLESDTVYSESKEKAAARFYIMQCSRLIKEEVSQVPLKDLITSLQGPLISKSSRSWTITPVIDYFHVLPYSEIISKWISREAFSNRLQDSRVTEKNIEVDTPEVTDFYVNKDTFTALDSKPNSNNIDSPKQKENNGSCTPTLSDSINEPMEMDVNEYSIFKSQNKEKCQNIIANTVQVGEDQDKNNLSVKYNSNGSSSAIKALKVDSTRMLIAEGGINNLASLHNIYANMPNTSSEKGILDYSIQTTNHSNSDLEKLQILSDSKKMLSQTALAALIRKRNELALQQRKIEDEIAVCDKKIQRLLTEGEDDFKLKIESIIEGCNDTWVRNQERTCEQQSLPLKRKKLSEAVITTQSPCQELDDVCRANNWVLPTYHLSHSDGGFKANVTVKGVEFQCSFEGNVGSNPPEARESAAAQMLTNLRSMAKLAQ 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2732 657 Coils Coil 500 520 - -
Ssu3g2732 657 MobiDBLite consensus disorder prediction 346 374 - -
Ssu3g2732 657 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 583 651 IPR014720 -
Ssu3g2732 657 PANTHER ALEURONE LAYER MORPHOGENESIS PROTEIN 1 654 - -
Ssu3g2732 657 CDD DSRM_SF 586 646 - -
Ssu3g2732 657 Gene3D - 555 651 - -
Ssu3g2732 657 SUPERFAMILY dsRNA-binding domain-like 580 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2732 Ssu-Chr3 81510991 81521838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2732 - - pvu:PHAVU_011G055000g 1016.14