Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2730 atgACGGTAGCAGCAGGAATCGGTTACGTTCTGGTAGCGCTAGGaccctctctctccctcttcgCTTCCGTAATTTCCAAAAAGCCCTTCTTGATTCTCACCGTTCTCTCCAGCACACTGTTGTGGCTTATTAGTTTGATCGTGCTGTCTGGAATATGGAGGGGGTTTTTGCCGCTGAATACAACAGCTTGGTGGCCTTTTGGAATACTTATATTCTCTTCTGTTGCTTTTCAAGAAGGGCTCAGGCTTTTCTTCTGgaaaatatataaGAGGTTGGAAGATATGTTAGATGCTTTTGCTGACAGAGTATCAAAACCACATCTTCTCCTGACAGATAAGATGCTGATTGCTCTGGCTGGTGGGTTGGGTCATGGTGTTGCCCATGCTGTGTTCTTCTGCATCAGCCTATTAACTCCTGCATTTGGTCCAGCAACATATTTCGTTGACAGGTGTTCACAGGttccatttttccttctttctgCTGTTATTGCTCTTGCATTTGTCACAATCCACACTTTCTCAATGGTCATAGCATTTAATGGGTACACAGAGGGGAACAAAGTGGATCAATATTTTGTTCCCATTGTTCACATTGTTGCAGGAATGGTGGTAAAATCTCAATCTTTGCATTATATTTTTGCACTATACTTTACTACTGTAACTAGTAACTACCcatcttctttctcttgttcCATTACCATTTACCAACCTCAACATATTAGCTGTTGTCCAGCTAATATTTACAACACCAACATATTTACAATAGAAGGCTAG 774 0.3786 MTVAAGIGYVLVALGPSLSLFASVISKKPFLILTVLSSTLLWLISLIVLSGIWRGFLPLNTTAWWPFGILIFSSVAFQEGLRLFFWKIYKRLEDMLDAFADRVSKPHLLLTDKMLIALAGGLGHGVAHAVFFCISLLTPAFGPATYFVDRCSQVPFFLLSAVIALAFVTIHTFSMVIAFNGYTEGNKVDQYFVPIVHIVAGMVVKSQSLHYIFALYFTTVTSNYPSSFSCSITIYQPQHISCCPANIYNTNIFTIEG 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2730 257 Pfam Aph-1 protein 2 208 IPR009294 GO:0016021|GO:0016485|GO:0043085
Ssu3g2730 257 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 207 IPR009294 GO:0016021|GO:0016485|GO:0043085
Ssu3g2730 257 PANTHER GAMMA-SECRETASE SUBUNIT APH-1 1 207 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2730 K06172 - gmx:100794637 353.214