Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2699 ATGGCCTCCGGACTCGCCCTCCGACTGAGATCCCACCTCCGCCGCCCCGCCTCGCTCCTCCCCGCCTCCCTCCGCCAACCTCCCTTCCAACCCTCGCCGCCAGTCCTCCTCGATCCCCACATCCCTCTATCCGGCCGCCGCCGCCTCCTCTCCACAGCGCGGCGCCCGCCGCCGCGCCCGAAGAAGGCGGCGGACATCGGGGCGCGCGCCCGGCAGCTCCAGACCCGGAGGCTCTGGACGTACGCCCTCACCTTCGGGTGCATGGCGGGCTTCGTCGTCATCGTCCTCAACAACTTCCAAGACCAGCTGGTGTTCTACGTCACCCCAACCGACGCGCTCGAAAAGCACGCCAACAACCCCACGACGGCGAGGTTCCGGCTGGGCGGGCTGGTCCTCGAAGGCAGCGTGGTGTACCCGGCGTCGTCGCCGGAGGTGGAGTTCGTCATCACCGACCTGATCACCGACATCGTCGTCCGGTACGAGGGCTCGCTGCCCGATTTGTTCCGGGAAGGGCACTCCGTGGTCGTCGAAGGGGTCGTGAAGCCGTTCACGGAGGAGATCAAGAAGGAGGTGTCGGCGAAGAACGTGTCCGAGAAGGCGCGCAGGGGAGAGTGTTATTTCTCGGCCACGGAGGTTCTCGCCAAGCATGATGAGAAGTATATGCCTAAGGAAGTTGCTGCTGCTATTGAGAAGAACAAGAAGATTATTGAGGAAGCTGCCACCGTGGCGGCGGAGGCACCCAAGACCCCCTAG 753 0.6521 MASGLALRLRSHLRRPASLLPASLRQPPFQPSPPVLLDPHIPLSGRRRLLSTARRPPPRPKKAADIGARARQLQTRRLWTYALTFGCMAGFVVIVLNNFQDQLVFYVTPTDALEKHANNPTTARFRLGGLVLEGSVVYPASSPEVEFVITDLITDIVVRYEGSLPDLFREGHSVVVEGVVKPFTEEIKKEVSAKNVSEKARRGECYFSATEVLAKHDEKYMPKEVAAAIEKNKKIIEEAATVAAEAPKTP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2699 250 Pfam CcmE 74 223 IPR004329 GO:0017003|GO:0017004|GO:0020037
Ssu3g2699 250 SUPERFAMILY Heme chaperone CcmE 99 228 IPR036127 GO:0005886|GO:0017003|GO:0017004
Ssu3g2699 250 Hamap Cytochrome c-type biogenesis protein CcmE [ccmE]. 71 233 IPR004329 GO:0017003|GO:0017004|GO:0020037
Ssu3g2699 250 Gene3D - 99 229 IPR012340 -
Ssu3g2699 250 MobiDBLite consensus disorder prediction 48 67 - -
Ssu3g2699 250 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL 1 245 IPR004329 GO:0017003|GO:0017004|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2699 - - gmx:100806496 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2699 3 80820134 80820886 Ssu3g2699 3 80820134 80820886 ECH