Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2698 ATGGATTCGCAGGTCTTGCTGGGTGTTGCACTTTCATCCGTGGGTGGTTTCAGCACTTCCATCGGTGCACTTTTTGTAATCCTTTGTCAAGCTCCAAGTTTGAAGGTGCTTGGGTTGTTACAGGGTTTTGCTGCTGGTTTGATGCTGAGCATATCATTCTTTGATCTGGCTCATAATGCCTTGAACACACTTGGCTTCCTGAGAGGCAACCTTTGGTTTTTTGCTGGTGTCATATTCTTTGCTGTTGTTGCCAATTTTATACCAGAACCAGCAGTTGCTCCTCCCACTTCAGATGATAAGAgtacaaagAGAGTtggaaaagaaggaaacaaagaCATTATGAAAAAGCGTCGCCGTCAAGTTTTACTCAGTGGGGTTATTACAGCCATAGGTATAAGTTTGCATAATTTTCCAGAAGGAATGGCAGTGTACCTTGGATCCATGAAGGGCCTTCGTGTTGGTCTTAACCTTGCCCTGGCCATTGCTCTACACAATATCCCAGAGGGTGTTGCTGTTGCGCTTCCTGTCTATTTTGCGACACAGAGTAAATGGGAGGCATTCAAATTGGCATCACTTTCTGGCTTTGCTGAGCCCCTGGGTGTTATAATTGTAGCTTGTTTATTCCCTACCAACCTAAATCCTGAGATTCTTGAAGGTATCCTTGGATCAGTTGGTGGAGTTATGGCTTTTCTAACCCTTCATGAAATGCTGCCGTTGGCTTTTGAGTATGCGGGACAAAAACAATCTGTTAAGGCCGTCTTTTGTGGGATGGCTTTCATGTCTgcaagTTTGTATTTTCTACGTATCAGCTTACCAGAGGACCTGTAA 828 0.4263 MDSQVLLGVALSSVGGFSTSIGALFVILCQAPSLKVLGLLQGFAAGLMLSISFFDLAHNALNTLGFLRGNLWFFAGVIFFAVVANFIPEPAVAPPTSDDKSTKRVGKEGNKDIMKKRRRQVLLSGVITAIGISLHNFPEGMAVYLGSMKGLRVGLNLALAIALHNIPEGVAVALPVYFATQSKWEAFKLASLSGFAEPLGVIIVACLFPTNLNPEILEGILGSVGGVMAFLTLHEMLPLAFEYAGQKQSVKAVFCGMAFMSASLYFLRISLPEDL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2698 275 Pfam ZIP Zinc transporter 118 261 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ssu3g2698 275 PANTHER ZINC/IRON TRANSPORTER 2 267 - -
Ssu3g2698 275 PANTHER ZIP METAL ION TRANSPORTER FAMILY PROTEIN 2 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2698 Ssu-Chr3 80814514 80818410 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2698 K07238 - gmx:100793378 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2698 3 80814514 80818410 Ssu3g2698 3 80814514 80818410 ECH