Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2679 ATGCGTTTGTTCAGCGACAAAGCAGCGGTTGCTTTCCTTTGCaagATTCTATGTCGTGGGATTTGGTGCCAGAACTTGAACCGCTGCCGATTCAAAGACCTACCGATGTTCAATTCGGATGTTATGCAGCAGCAAATACCTAAAACACTTGCAGTTAGACCTTCTTTGGGTGTTATCTGCAACACAGTGAATTGCCTTGAAGAGCAATCCTTGTATCGGCTACACCAGGTGTACAAAGTCAGTTTCTTCCCCATAGGCCCTTTACACATGATTGCTGAAGAAGATTCCTCCAGCAGCAGCTTTGTGGAAGAAGATTATAGCTGCATAGGTTGGCTCAACAACCAAGCAAGAAAATCTGTGTTGTATGTGAGTTTGGGAAGCATAGCTAGTTGGGACGAGAAAGAGCTAACTGAAGTGGCTTGGGGCTTAGCCAATAGCAAACAGAATTTCCTTTGGGTTGTTAGACCTGGCACAATTAATGATGTTTCAGAGTGGCTACAATCATTGCCGGAACATGTTAAAGTAGCAATAGCAGAAAGGGGTTGCATTGTGAAATGGGCTCCCCAAGGTGAGGTTTTGGCACACCAAGCTGTGGGAGGGTTTTGGAGCCATTGTGGTTGGAATTCCACGCTGGAGAGTTTGTGTGAAGGAGTACCAATCATGTGCCAACCTCATTTTGGGGATCAGAGGGTAAATGCCAGGTTGTTGAGCCATGTATGGAAGGTGGGTCTAGAGTGGTCCAGTGTCATGGAAAGGGATGAAATAGAAGGGGCAGTGAGAAGACTGATGGTGAATCCAGAAGGGAAGGAGATGGGGCAGAGAGCATTGAAATTGAAGAATGAGATTAGGTTAGCTGTGAAAGGTGGTTCTTCCTATGATGCCTTGAATGGGTTGGTAGAGAGTATCTTGTCAGTCAATCTCTAA 924 0.4556 MRLFSDKAAVAFLCKILCRGIWCQNLNRCRFKDLPMFNSDVMQQQIPKTLAVRPSLGVICNTVNCLEEQSLYRLHQVYKVSFFPIGPLHMIAEEDSSSSSFVEEDYSCIGWLNNQARKSVLYVSLGSIASWDEKELTEVAWGLANSKQNFLWVVRPGTINDVSEWLQSLPEHVKVAIAERGCIVKWAPQGEVLAHQAVGGFWSHCGWNSTLESLCEGVPIMCQPHFGDQRVNARLLSHVWKVGLEWSSVMERDEIEGAVRRLMVNPEGKEMGQRALKLKNEIRLAVKGGSSYDALNGLVESILSVNL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2679 307 PANTHER UDP-GLYCOSYLTRANSFERASE 76E5 24 303 - -
Ssu3g2679 307 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 23 304 - -
Ssu3g2679 307 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 103 270 IPR002213 GO:0008194
Ssu3g2679 307 Gene3D Glycogen Phosphorylase B; 37 299 - -
Ssu3g2679 307 Gene3D Glycogen Phosphorylase B; 106 285 - -
Ssu3g2679 307 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 24 303 - -
Ssu3g2679 307 CDD GT1_Gtf-like 51 300 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2679 Ssu-Chr3 80530069 80531499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2679 3 299 Glycosyltransferase AT3G46670 45.141 4.03e-89 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2679 - - gmx:100786860 502.286