Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2677 ATGGCTATTGACCTTCACACCGGGGACACATCGTTACCTTTTCCTTATCAGTTCCTCCATGACGAGCGGGGCGAACATACTCTCCCACCATCACGTGACCTTAATCCAGTTTTAAAGCCACAGGTGCTGCTGATTCCCCGTGAGTTAGAATCGCGTACAAGTCCGCCACCTCACTCCACCGAGGCACACACCAAAGGCAATCTCGTCGCTGACATGCCTCACTTCTTGCTTCAAGACGACAACAAATTCGATTTCTCAGGCATTGGTTCTGATCATTTGGAATCGCCATGGGACTCAATTAGTTCGCCCCAGTCAACGCTCTCGTCAACTTTGGGCTCGATTCAGGGGAGCCATGAAGGCTCCTCTCAGGAACCATCGCCTAACAGCCATGACTTCTGTTGGGACAGCACCTACGACGTGGTGGAGATGTTAGAGATGATGAAGCTTGACGAAAGAGGCAGTTCCAAACACCATCCTGGTTATGAGATTCAGAGGTTGGAGACCTCAAACGTTGGAGTCTGCTCTCTCCTTCAGGAACAAATTCGAGCTATTCAATTGTCTCGGGTCCGGCAAGAGCAGATTCTGTCTCAGAAACAAAAGCCAACCGCATATAGGGGAAAAAATCACGGGCAGATATCCCAGCAATTTCGGAAGAAAGGTGAAGGGGTTGATGTTGGGTCTGATAACGGATGGAGCACTCGTCCACCGTGGAGCACTCGTTCACACCAGCAAACCGGTTCGGCGATTTTTCTGGACACATCCGGTTCAAGAGGCAGATCTTGTGGGACTGGTGTTTTCTTGCCACGTGGCGGAACAAGTGCCCCGTTCGAGTCACGTAGGAAACCAGGTAAAGGTTGCTCCACAGTTCTTATACCCGCTAGAGTAGTTCAGGCTTTGCAACTCCACTTTGAGCAAATGGCTGTCACGTCTGGGTCCAAAGCTGGTGGCTTCCCTCCCCTACACGATGTTTTAGTGAGTAACAGGGATGGCATGTATTCACTACAAAAGCGGCAATCACGGAACAAACCGACACATATCCAGAATGAGATGATTCTGCCTCAAGAATGGACCTATTGA 1077 0.5014 MAIDLHTGDTSLPFPYQFLHDERGEHTLPPSRDLNPVLKPQVLLIPRELESRTSPPPHSTEAHTKGNLVADMPHFLLQDDNKFDFSGIGSDHLESPWDSISSPQSTLSSTLGSIQGSHEGSSQEPSPNSHDFCWDSTYDVVEMLEMMKLDERGSSKHHPGYEIQRLETSNVGVCSLLQEQIRAIQLSRVRQEQILSQKQKPTAYRGKNHGQISQQFRKKGEGVDVGSDNGWSTRPPWSTRSHQQTGSAIFLDTSGSRGRSCGTGVFLPRGGTSAPFESRRKPGKGCSTVLIPARVVQALQLHFEQMAVTSGSKAGGFPPLHDVLVSNRDGMYSLQKRQSRNKPTHIQNEMILPQEWTY 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2677 358 MobiDBLite consensus disorder prediction 96 131 - -
Ssu3g2677 358 MobiDBLite consensus disorder prediction 197 215 - -
Ssu3g2677 358 PANTHER TIP41-LIKE PROTEIN 6 358 - -
Ssu3g2677 358 MobiDBLite consensus disorder prediction 197 245 - -
Ssu3g2677 358 MobiDBLite consensus disorder prediction 231 245 - -
Ssu3g2677 358 PANTHER G PATCH DOMAIN PROTEIN 6 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2677 Ssu-Chr3 80503602 80506119 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2677 - - gmx:100787401 500.36