Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2676 ATGAGCAGTGATCGGAAGATTGGTTTGGCCTTGGATTTCTCCAAAGGAAGCAAGATCGCTCTCAAATGGGCTGTTGATAATCTTCTCCGCAACGGTGACACATTCTATATCATCCACATCAAGCCTCCCCAAGGCAGTGAATCCCGAAATCTTCTCTGGGCCACCACCGGTTCACCTCTGATTCCGTTGTCTGAGTTTCGTGAGAAGGACTTGATGCATCATTACGAGATGGATACTGATGCCGACGTCTTGGACCTACTTGACACCGCTTCTAGGCAGAAACAGGTGATGGTGGTTGCAAAGCTATATTGGGGGGATGCAAGAGAGAAAATTTGTGAAGCTGTTGGGGATTTGAAGCTTGACTCTTTGGTCATGGGTAGCAGAGGCTTGGGCGCCATACAGagGGTATTGCTGGGGAGTGTGACCAATTATGTCACTACAAATGCGAGTTGCCCTGTAACAATTGTGAAGGACTCTGCTCCTTCCACAATCTGA 495 0.4808 MSSDRKIGLALDFSKGSKIALKWAVDNLLRNGDTFYIIHIKPPQGSESRNLLWATTGSPLIPLSEFREKDLMHHYEMDTDADVLDLLDTASRQKQVMVVAKLYWGDAREKICEAVGDLKLDSLVMGSRGLGAIQRVLLGSVTNYVTTNASCPVTIVKDSAPSTI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2676 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Ssu3g2676 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Ssu3g2676 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Ssu3g2676 164 CDD USP_Like 6 156 - -
Ssu3g2676 164 Gene3D HUPs 2 163 IPR014729 -
Ssu3g2676 164 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE SUPERFAMILY PROTEIN 1 162 - -
Ssu3g2676 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Ssu3g2676 164 Pfam Universal stress protein family 5 157 IPR006016 -
Ssu3g2676 164 PANTHER IMP2'P 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2676 Ssu-Chr3 80493420 80494853 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2676 - - gmx:100306505 287.73