Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2665 ATGGCTCCCACTCTTACATCCAATTCATCTTTCTTAACCACCACGCCTCATTCAAGGTTGACCCTCCAGAATCCAAGGCTCAGAGTGTTCGCAAAGAAGTCTGGATCATTCCCATCATTTGGGCTAGGCAAACCGAAAGATGATTCTTCTCCTGAAGAAGGAGATAGCTCATCCAATTCTAACCCCTTTCGTCTCAACTTTGGAAAGATACCTGATGTGACTTCCTTGATCCCAGTTCCAAGCAACACTTCTTCGCCAGGTTTTTCATTTGGAAACCCAAGGCGCAAGGACCCTTCAACAGTGTTTGTTGCTGGCGCAACAGGGCAGGCTGGTATTCGCATTGCACAAACGCTGCTTAGGAAAGGCTTTAGTGTACGAGCTGGAGTCCCCGAACTTGGTTCTGCACAAGAACTAGCTCGTCTTGCTGCACAATACAAGATTATATCAAATGAACAGGCAAAGCGTCTGAACGGTGTGCAGTCAAGCTTTGACGATGCAGACTCGATAGCCAAAGCTATCGGCAATGCCAGCAAAGTGGTTGTCACTATTGGTCCCACAGAGAATGGTCCGACAGCAGAGGTGTCCATATCAGACGCCTTGCAAGTGGTTCAGGCAGCACAGCTGGCAGGTGTTGGCCACGTGGCTGTCATCTACGACGAGAGCAGCTCCGGGACCTCAACCTACAATGTACTGGATGGCCTCTCCTCCTTCTTCAACAACCTCTTCTCCCGGTCTCAACCGTTGACCATACAGGAGTTCTTGCAGAAAGTGATTGAAACGGACGTCAAATACACCTTCATTAAGACAAGTTTGACCGATGATTTCACACCGGAGAGTTCCTACAATGTGGTCGTCTCGGGCGAAGGAAGCGCCGGTGCGAACGACTATAAAGTAGCAAAGTTCAAGATTGCGTCGTTAGTGGCTGATGTCTTCTCCAACACTGAGGTAGCAGAAAACAAGGTTGTGAAAGTGTATTCGGATCCCAATGCCCCCTTGAGGCGGGTAGATGAACTTTTCAGCACTATTCCTGAGGATGGAAGAAGGAAATTTTATGCTGAAATGCTGGAAAAAGCTAAGGCAGAGGAAGAGGCAAGAGTGGCTGCTGAAAAGGCCCGTGAAGCTGCTGACTCAGCAAAGAAGTTGGAAGAAGAGGTGAAAAAGCTTTCACAGCAAGAAGCACGGGCTGCAAGTCTGGCTCAAGAGGCCCAAGAGAAGGCAGAGGCAGCTGGGGCTTCGGTGGAAACCCTCCTGAACAAGGCAAAAGACTTTGGTGCAGGGTTTTCCTGGGATAAGTTGGGCTCACAAATTACTACTTCAATCCAAAAGCCTGATGAGGATGAGAAACCAAAGGCGCAGCTAGCCACTGTAAGGGGACAGGCCAAGGCTCGGAATCTCACGCCTAACAAAGCAGTGGTTAAACAAACACCTCCGAGAAGGGCTGCTAGTAAACCAAAGGAGGAAAAACCAGAGACACCAAGGGAGGTGAGGAATGTATTTGGTGGCCTGTTCAGGCAAGAGACTATCTATGTTGATGATGACTAG 1542 0.4903 MAPTLTSNSSFLTTTPHSRLTLQNPRLRVFAKKSGSFPSFGLGKPKDDSSPEEGDSSSNSNPFRLNFGKIPDVTSLIPVPSNTSSPGFSFGNPRRKDPSTVFVAGATGQAGIRIAQTLLRKGFSVRAGVPELGSAQELARLAAQYKIISNEQAKRLNGVQSSFDDADSIAKAIGNASKVVVTIGPTENGPTAEVSISDALQVVQAAQLAGVGHVAVIYDESSSGTSTYNVLDGLSSFFNNLFSRSQPLTIQEFLQKVIETDVKYTFIKTSLTDDFTPESSYNVVVSGEGSAGANDYKVAKFKIASLVADVFSNTEVAENKVVKVYSDPNAPLRRVDELFSTIPEDGRRKFYAEMLEKAKAEEEARVAAEKAREAADSAKKLEEEVKKLSQQEARAASLAQEAQEKAEAAGASVETLLNKAKDFGAGFSWDKLGSQITTSIQKPDEDEKPKAQLATVRGQAKARNLTPNKAVVKQTPPRRAASKPKEEKPETPREVRNVFGGLFRQETIYVDDD 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2665 513 Pfam NAD(P)H-binding 105 313 IPR016040 -
Ssu3g2665 513 Gene3D - 92 331 - -
Ssu3g2665 513 Coils Coil 351 419 - -
Ssu3g2665 513 MobiDBLite consensus disorder prediction 1 64 - -
Ssu3g2665 513 MobiDBLite consensus disorder prediction 1 22 - -
Ssu3g2665 513 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC 1 513 - -
Ssu3g2665 513 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 99 329 IPR036291 -
Ssu3g2665 513 MobiDBLite consensus disorder prediction 479 494 - -
Ssu3g2665 513 MobiDBLite consensus disorder prediction 439 498 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2665 - - gmx:100801140 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2665 3 80338246 80342105 Ssu3g2665 3 80338246 80342105 ECH