Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2664 ATGTCGGGCGGTTTCTTTCGAGGCACATCTGCGGATCAGGACACTCGGTTTTCGAACAAGCAAGCGAAGCTGATGAAATCGCAGAAGTTTGCACCGGAATTGGAGCATCTGGTGGACATGACGAAGGTGAATATGGAGGTAATTAAGCCTTGGATCACCAGAAGGGTGACTGAGCTTCTAGGTTTTGAGGATGAAGTGCTTATTAACTTCATACATGGTCTTCTGGATGCAAAGGAAGTGAATGGGAAGGAAGTTCAAATACAAATTACTggttttatggaaaaaaatacTGGAAAGTTCATGAAAGAGCTTTGGACACTTCTTCTCAGTGCACAGAAAAATGCCAGTGGTGTTCCTCAGCAGTTCTTGGATGCTAAGGAAGAAGAACTCCTGAAGAAAAAGGCTGAAAATGACCGGATAACAAGTGAAATTCAGAGGAAAAAAGATAAGGAAGGTAGAGAAATCATGGAGGAGAGGCTGAAGAAACTGGACGGTGGATTTGATTCCAAGGATAATGATACTGCATCAGACCCAGCCTTGAAGCCCAGGGATTCAGGGTACTATGATTGGGATGGGAAGGAAACTGACAAGAGGAATGGTGCTAGAGCAAGGAGCAGGCTTTCTAGGTCCCCACATTCACCTGCAGTTTCTACTTCGCCTCATCGAGGTTCACCTTCAAGGTCAATGAGCAAATCATTTTCGAATTCCCAAAGTTATTCAGGTGGTAGACATAGGTCAAGGAGTATATCCAGGTCTCTAGAGGCTCGAGGACGCTCTCTTTCTTTTGAAAGGATTCGCCGTTCTCCACGACGACGATCTATTTCTCCTCATAGGCGTTCACCACGACATTCTCCTCATAGAAGGCTACCTTATTCAAGGAGAAGATCCAGATCCCGCTCAAGTTACAGATCTCCTTCCCTTGTACGACGCAGAATGCATTCCCCAGTCCACCGTAGTTCACCTTCTTTTAGACGACGTAGATCACCTTCTCCAGTGCGACGTCGTAGATCACCTTCTCCAGTGCGACGACGTAGATCACCTTCTCTAGTGCGAAGACGTAGATCACCTTCTCCAGTGCGACGACATAGATCACCTTCTCTAGTGAGACGACGTAGATCACCTTCTCCTAGGCATTGGCATAAATCACCTTCTCCTGGGCGCCGACATAGGTCACCTCCCTGGCGTCGACATAGATCACCTTCACCTCTTGGGCGGCAGAGGTCGCTCTCACCTAGACGACGAAGATCTCCTGTCTCTCGGCATAGGTCACCTTCACCAGTGCGTCGAATACCACCAACCAATGTACGACATAGATCAGACTCTCCCTTGCAATCCCCCTCCCCTATACGACGAAGGTATGGTAGTAGAACTCCTCCACACTCTCCACCTCCATTGCAACGTAGATCACCTATTTCTGGGAAGAAAAGATCTCCAAGTATGTCCCCACAGAGGTCTCCTCGAGATGAATGGAGTTCTCAATCTCCAATACGACACATATCTCCATCTCCAATTAGGAAAAATTCCCCAGGACACCAAAGAATTCCCGTGCAGTCTTCTGTGGGGAGGGTCAGAACACAAGAAAGATTGTCATCTGAGACTCATGAACCCTCTAGTCCTTTGGGGTCTGTCCGAAGAGATAAAAGTGGTAAAGCTTCACACTATAAATCACAAGATTCAATGTCCACACCTGAGAAGTCTCCAACTCGTTCTGTATCTCCAGAAGCAAGGAGTGAGACCAGCAGTGAAGGTAGAAGtcCTCACGAGAGCCCTATGaaacaaagaagagaaaggtTGTCCAATGAAAGAAGCTTGAGTCCTCTGAAGAAACAGAGAACCCAGAAACCTAGACATGGCAGCCCAGAGACGAGAGAAGAAGCAGAAGCAGCATACTATTCCAGAGAAAGCAGAGATCCTAAAATGAATTCATCGCAGAAGATATCAAAACATTCCCCAGTTAGTAAGCGAAAAGGTTCACCTGCAAAATATCGTCATGAGGATGAGTTCTCTCCTGAAAGAGTGGCAGGTCATCCAACTTCTGAATATCATCATTATGATAACAATGATTGGAATAAGAAAGGCAGGGAGATAAAACGTGATAAATCTTCTGGAAAGGGCAATGAATCTCCTTCTCAACAGAAGTCATCAATGAACAAAGTGACTTTTTCCAGGGAGAAGCCTCATGAAGCTTATGCtgtagatattaaaaaaccAGATGACAAGGACCAATCCCATTCAAACTATGCCAAAAGTAGTGATCGGCACCACAAATCTGAAGCCACTCAAGATTTAGTTGGAAAAGTTGATCGTGTCAATCAGAGTGCTTCATATGATTCTGTTTCTGAGGAAAGTGGTAAGCATAGACGGGAGGGAAAGGATAGGAGAAAGCATAAAAGGTCTGAGAAAAAATATGTGTCTTCTGATGAGGATTATAGTGATGATTCTGAGGTAGAGGACAGGAAAGAGGCCAAGAGGAGgagaaaagaggagaagaagCTGCGGAAGGAGGAGAAGCGTCGAAGACGTGAAGAGAGGAGACACAGAAGGGAAGAACGGCGTGCGGAGAAGCTGAAAATGAAGAGTAAAGCAGACTATACTTCAGATGAGGAACGAATGGATGATCATCAAAGTGATAGTGAAGAGACCCCATCTGAGCAAAAGAAGCTTGAGATTGAATTACGGAACAAGGCTCTTGAATCCCTCAAAGCAAAGAGGGGCATGAATAACTAA 2727 0.4455 MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWITRRVTELLGFEDEVLINFIHGLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQQFLDAKEEELLKKKAENDRITSEIQRKKDKEGREIMEERLKKLDGGFDSKDNDTASDPALKPRDSGYYDWDGKETDKRNGARARSRLSRSPHSPAVSTSPHRGSPSRSMSKSFSNSQSYSGGRHRSRSISRSLEARGRSLSFERIRRSPRRRSISPHRRSPRHSPHRRLPYSRRRSRSRSSYRSPSLVRRRMHSPVHRSSPSFRRRRSPSPVRRRRSPSPVRRRRSPSLVRRRRSPSPVRRHRSPSLVRRRRSPSPRHWHKSPSPGRRHRSPPWRRHRSPSPLGRQRSLSPRRRRSPVSRHRSPSPVRRIPPTNVRHRSDSPLQSPSPIRRRYGSRTPPHSPPPLQRRSPISGKKRSPSMSPQRSPRDEWSSQSPIRHISPSPIRKNSPGHQRIPVQSSVGRVRTQERLSSETHEPSSPLGSVRRDKSGKASHYKSQDSMSTPEKSPTRSVSPEARSETSSEGRSPHESPMKQRRERLSNERSLSPLKKQRTQKPRHGSPETREEAEAAYYSRESRDPKMNSSQKISKHSPVSKRKGSPAKYRHEDEFSPERVAGHPTSEYHHYDNNDWNKKGREIKRDKSSGKGNESPSQQKSSMNKVTFSREKPHEAYAVDIKKPDDKDQSHSNYAKSSDRHHKSEATQDLVGKVDRVNQSASYDSVSEESGKHRREGKDRRKHKRSEKKYVSSDEDYSDDSEVEDRKEAKRRRKEEKKLRKEEKRRRREERRHRREERRAEKLKMKSKADYTSDEERMDDHQSDSEETPSEQKKLEIELRNKALESLKAKRGMNN 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2664 908 MobiDBLite consensus disorder prediction 161 889 - -
Ssu3g2664 908 SMART pwi_2 40 114 IPR002483 GO:0006397
Ssu3g2664 908 Gene3D PWI domain 33 125 - -
Ssu3g2664 908 MobiDBLite consensus disorder prediction 210 246 - -
Ssu3g2664 908 MobiDBLite consensus disorder prediction 554 579 - -
Ssu3g2664 908 MobiDBLite consensus disorder prediction 247 269 - -
Ssu3g2664 908 MobiDBLite consensus disorder prediction 270 422 - -
Ssu3g2664 908 MobiDBLite consensus disorder prediction 580 643 - -
Ssu3g2664 908 MobiDBLite consensus disorder prediction 720 763 - -
Ssu3g2664 908 MobiDBLite consensus disorder prediction 705 719 - -
Ssu3g2664 908 MobiDBLite consensus disorder prediction 161 203 - -
Ssu3g2664 908 MobiDBLite consensus disorder prediction 658 704 - -
Ssu3g2664 908 Coils Coil 123 150 - -
Ssu3g2664 908 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 1 400 - -
Ssu3g2664 908 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 369 904 - -
Ssu3g2664 908 MobiDBLite consensus disorder prediction 437 451 - -
Ssu3g2664 908 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 400 - -
Ssu3g2664 908 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 369 904 - -
Ssu3g2664 908 MobiDBLite consensus disorder prediction 830 846 - -
Ssu3g2664 908 Pfam PWI domain 46 115 IPR002483 GO:0006397
Ssu3g2664 908 MobiDBLite consensus disorder prediction 847 889 - -
Ssu3g2664 908 MobiDBLite consensus disorder prediction 472 538 - -
Ssu3g2664 908 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Ssu3g2664 908 SUPERFAMILY PWI domain 25 132 IPR036483 GO:0006397
Ssu3g2664 908 Coils Coil 817 859 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2664 K13171 - gmx:100810238 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2664 3 80329667 80334946 Ssu3g2664 3 80329667 80334946 ECH