Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2590 ATGTTTTGTCCACTGGATGTGAAGGAATTCAGGATTGATGCATTGCTCGGAGGTGGATTACGTGAAGGTCAATTAACTGAACTTGTTGGGTCATCCTCGTCTGGAAAGACACAGgcatGTCTACTGTCTGCCTCAACTGTTGCAAAGCATAAGAGTTCAGTTATATACTTAGATACAGGCAACTCCTTTTCACCTCAGCGTATTGCACGTTTTGTTGGTCAGTCTTCTGGTTATGTTTTTGACAATCAGGTTGATCATATGCTCAAAAAAGTATTGGACAGGATAATTTGCTACTCAGTGTTTGACATCTATCAGATGTTTGATGTGCTGCATCAACTGAAGATTAATTTAAGATCTGAGATTGTGAAATCAAATCAGCATGTTCGATTGCTTATTGTTGATTCAATCTCTTCATTGATTACCCCCATCCTTGGGGGCAGTGGTCCTCAGGGACATGCTTTAATGATATCTGCTGGGTTTTTACTGAAGAAGTTGGCACATGAGCATAATATTGCAGTATTGGTGACGAATCATGTGGTGGGCGGAGAAGATGGTATTTCCAAACCAGCACTTGGAGAGAGTTGGAAGAGTGTCCCACATGTACGGCTTTTTCTTTCTCGTGATTGTGGAAGCAATGTCTGCAATATTTCAATGCTAAAACATCCATCTATGGCTTCTGGTAGGGCTGCAAGTTCAACTATGTACTTATGA 711 0.4079 MFCPLDVKEFRIDALLGGGLREGQLTELVGSSSSGKTQACLLSASTVAKHKSSVIYLDTGNSFSPQRIARFVGQSSGYVFDNQVDHMLKKVLDRIICYSVFDIYQMFDVLHQLKINLRSEIVKSNQHVRLLIVDSISSLITPILGGSGPQGHALMISAGFLLKKLAHEHNIAVLVTNHVVGGEDGISKPALGESWKSVPHVRLFLSRDCGSNVCNISMLKHPSMASGRAASSTMYL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2590 236 Gene3D - 9 234 IPR027417 -
Ssu3g2590 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 227 IPR027417 -
Ssu3g2590 236 Pfam Rad51 11 214 IPR013632 -
Ssu3g2590 236 ProSiteProfiles RecA family profile 1. 1 179 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Ssu3g2590 236 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 4 11 232 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2590 K10871 - gmx:100780427 398.667