Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2587 ATGGCACGCCTTGAATCTCTTTCCATGACTATGCCCCTCAATGCCATAGTTTTTCTAGCACTTATATTCTTTGAAATCACTTCCACTACTTCAACCCGAATCCTTGATGAGGTAGAAACACCAAGCACAGCACCGGAAGAACCTGACGTTGCTGAATCCCCTGTTTCTTCCATTGTCCCTCCACTTGTGGCCGCAACATCCCCTGTTGCGGCAGTCAACGCTGTTGACCAACACCACACGCTCTCGTTTTTCATGCACGACATTCTGGGAGGTTCCAACCCCACAGCTCGAGCGGTGACCGGCGTCGTTACGAACCCTGCTCTGAACGCTCAAGTTGCATTTGCTAAGCCCAACGGCGCAAACCTTCCTCTCAACAACGGCGTTCCGCAGAACAACAACAACGGCGGAattctcaacaacaacaaccttccCTTCCTGACCGGACTGGGCGGTACCACGGGGAACGTGTTCAACAACAACGGCAACAACTTGATCAACGGAGGGATCGGTTTCCCGCTGACAAACCCGAATCAGCTCCCGGAAGGAATGACACTGCAGAAGCTCATGTTTGGGACAATGACTGTGTTTGATGATGAGCTAACGGAAGGGCACGAGTTGGGTTCGGGTCTGGTGGGGAAGGCACAGGGATTTTACATAGCCAGCGCTGTGGATGGAACCAGCCAGCTAATGGCTTTCACCGCTAAGTTTGAAGAGAATGGTTACGTGGACAGTCTCAGCTTCTTTGGTGTGCATCTCACGCAAGTGTCGGAGTCCCAACTTGCCATCATTGGAGGGACGGGAAAGTATGTAAATGCAGAGGGGTATGCCATTATTAAGACGTTTCCGGTAACCGGTCAGCAACATAATACTGATGGAGTCGAGACTCTCTTGCAGCTCACTGCCTATCTTGCCTATTAg 918 0.5011 MARLESLSMTMPLNAIVFLALIFFEITSTTSTRILDEVETPSTAPEEPDVAESPVSSIVPPLVAATSPVAAVNAVDQHHTLSFFMHDILGGSNPTARAVTGVVTNPALNAQVAFAKPNGANLPLNNGVPQNNNNGGILNNNNLPFLTGLGGTTGNVFNNNGNNLINGGIGFPLTNPNQLPEGMTLQKLMFGTMTVFDDELTEGHELGSGLVGKAQGFYIASAVDGTSQLMAFTAKFEENGYVDSLSFFGVHLTQVSESQLAIIGGTGKYVNAEGYAIIKTFPVTGQQHNTDGVETLLQLTAYLAY 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2587 305 PANTHER DIRIGENT PROTEIN 13 305 - -
Ssu3g2587 305 Pfam Dirigent-like protein 179 290 IPR004265 -
Ssu3g2587 305 PANTHER DIRIGENT PROTEIN 24-RELATED 13 305 IPR004265 -
Ssu3g2587 305 Gene3D - 173 298 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2587 Ssu-Chr3 79276158 79277075 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2587 - - vun:114169633 419.853