Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2585 ATGGCACGCCTTGAATCTCTTTCCATGACTATGCCCCTCAATGCCATAGTTTTTCTAGCACTTATATTCTTTGAAATCACTTCCACTACTTCAACCCGAATCCTTGATGAGGTAGAAACACCAAGCACAGCACCGGAAGAACCTGACGTTGCTGAATCTCCTGTTTCTTCCATTGTCCCTCCACTTGTGGCCGCAACACCCCCTGTTGCGGCAGTCAACGCTGTTGACCAACACCACACGCTCTCGTTTTTCATGCACGACATTCTGGGAGGTTCCAACCCCACAGCTCGAGCGGTGACCGGCGTCGTTACGAACCCTGCTCTGAACGCTCAAGTTGCATTTGCTAAGCCCAACGGCGCAAACCTTCCTCTCAACAACGGCGTTCCGCAGAACAACAACAACGGCGGAattctcaacaacaacaaccttccCTTCCTGACCGGACTGGGCGGTACCACGGGGAACGTGTTCAACAACAACGGCAACAACTTGATCAACGGAGGGATCGGTTTCCCGCTGACAAACCCGAATCAGCTCCCGGAAGGAATGACACTGCAGAAGCTCATGTTTGGGACAATGACTGTGTTTGATGATGAGCTAACGGAAGGGCACGAGTTGGGTTCGGGTCTGGTGGGGAAGGCACAGGGATTTTATATAGCCAGCGCTGTTGATGGAACCAGCCAGCTAATGGCTTTCACCGCTAAGTTTGAAGAGAATGCTTACGTGGACAGTCTCAGCTTCTTTGGTGTGCATCTCACGCAAGTGTCGGAGTCCCAACTTGCCATCATTGGAGGGACGGGAAAGTATGTAAATGCAGAGGGGTATGCCATTATTAAGACGTTTCCGGTAACCGGTCAGCAACATAATACTGATGGAGTCGAGACTCTCTTGCAGCTCACTGCTATCTTGCCTATTAgcctctctcactctctcttaTATACCACCGTTAACTTCTGCTTTAAACTTACAATTATTGCAAAATATTTGTGTTTCGTGTGA 999 0.4765 MARLESLSMTMPLNAIVFLALIFFEITSTTSTRILDEVETPSTAPEEPDVAESPVSSIVPPLVAATPPVAAVNAVDQHHTLSFFMHDILGGSNPTARAVTGVVTNPALNAQVAFAKPNGANLPLNNGVPQNNNNGGILNNNNLPFLTGLGGTTGNVFNNNGNNLINGGIGFPLTNPNQLPEGMTLQKLMFGTMTVFDDELTEGHELGSGLVGKAQGFYIASAVDGTSQLMAFTAKFEENAYVDSLSFFGVHLTQVSESQLAIIGGTGKYVNAEGYAIIKTFPVTGQQHNTDGVETLLQLTAILPISLSHSLLYTTVNFCFKLTIIAKYLCFV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2585 332 PANTHER DIRIGENT PROTEIN 13 303 - -
Ssu3g2585 332 PANTHER DIRIGENT PROTEIN 24-RELATED 13 303 IPR004265 -
Ssu3g2585 332 Pfam Dirigent-like protein 179 284 IPR004265 -
Ssu3g2585 332 Gene3D - 173 306 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2585 Ssu-Chr3 79263158 79264156 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2585 - - gmx:100781508 397.512