Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2583 ATGAAAGGAATTGATTTGTTCTGTTCTTCCTCTGCTTCCACGGCAGTAACTTGTAGCATGCACCATCGCTCTATGGTACATCGAAGCACCAAAAGCTACGACCATGATCGAAGGAAAAGCCAACTTCATGTTCCTTGTTCATCCCAATTGCCCATCAATCCTAAGCCTTACTTCGAGAAGCACAGAAAGAGCTCAGCTGATAAGCAAAACTGTGACATGCGTAGAAAAAGCTCTGCTGATGTCAACGACCTATATACTCATGCTAGTGCTGATGGTTCTTCCAGAAGATACCTCCTTGGTGATGCGCCGTTCATTGAGTGGGTATCTGAGTCTAATAAAATCGCAGCAATGGCTCCTTCTCAACGTGATGCCAAAGACAAGCCTATGGTCATGAACAGAAACGATCCTCCTAAGCTTCGGTCCTCTTCTTCAGCTCGCTCCAAGGACCagGTTGTGGTTCTGAGGGTGTCGTTGCACTGCAAGGCATGCGAAGGAAAAgttagaaaacatatttcaaaaatgGAAGGAGTGACATCATTCAGCATAGACatggagagaaagaaagtaaCCATCATCGGAGACGTGACACCACTAGGGGTACTGGCGAGTGTATCCAAGGTGAAGAATGCACAGCTATGGCCATCTTCTACATCGTCATCCTCATTAGTACTGTCATCATCTTCTATGCCAACATCTCCATGGTCGACATaa 711 0.4374 MKGIDLFCSSSASTAVTCSMHHRSMVHRSTKSYDHDRRKSQLHVPCSSQLPINPKPYFEKHRKSSADKQNCDMRRKSSADVNDLYTHASADGSSRRYLLGDAPFIEWVSESNKIAAMAPSQRDAKDKPMVMNRNDPPKLRSSSSARSKDQVVVLRVSLHCKACEGKVRKHISKMEGVTSFSIDMERKKVTIIGDVTPLGVLASVSKVKNAQLWPSSTSSSSLVLSSSSMPTSPWST 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2583 236 MobiDBLite consensus disorder prediction 28 76 - -
Ssu3g2583 236 MobiDBLite consensus disorder prediction 118 146 - -
Ssu3g2583 236 PANTHER OS08G0405700 PROTEIN 1 226 IPR044526 -
Ssu3g2583 236 ProSiteProfiles Heavy-metal-associated domain profile. 150 210 IPR006121 GO:0046872
Ssu3g2583 236 Pfam Heavy-metal-associated domain 154 200 IPR006121 GO:0046872
Ssu3g2583 236 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 1 226 - -
Ssu3g2583 236 Gene3D - 147 211 - -
Ssu3g2583 236 CDD HMA 153 206 IPR006121 GO:0046872
Ssu3g2583 236 MobiDBLite consensus disorder prediction 28 42 - -
Ssu3g2583 236 MobiDBLite consensus disorder prediction 56 76 - -
Ssu3g2583 236 MobiDBLite consensus disorder prediction 217 236 - -
Ssu3g2583 236 SUPERFAMILY HMA, heavy metal-associated domain 150 207 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2583 Ssu-Chr3 79238720 79239919 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2583 - - gmx:100807544 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2583 3 79238720 79239919 Ssu3g2583 3 79238720 79239919 ECH