Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2576 ATGGAGAAAGATGCAAGTGGCACAAGTAGCCCAGACCCTTCTTCGTTCAAGCTTCTAGTGTCGTGTCCTTCTGGCCTTTCACCCTCTCAGGTTTCGGTGTCATTCAGCGACGCCTACGACCGGATCCCCCATTCTGACGTCAGCTTGGAGAACACGATTTCCGAGATATGGGAGCAGAGGAGTCTGAAAAACAATTCGCTCTTCAACGGAAAGAAGTTCAGGTATGGAGGGTATGTTTTGGACACTGGAGGTGGATCCGACCGTGAACCACATTTATGCCTCCACCTAGGTTTGACAGATTATAGGACTTTTGTGGGGACAAATTTAAGTCCTTTGTGGGAAAGGTTCCTGGTTCCATCAGAAGATGATTCTGTTCTTTGTCAGCACACCTCCAGCCCACTAGGAAATGGTGCAGTTGTGGAGACAAATGACAATAAGATACTTGTATTACAACGAAGTAATAATGTTGGTGAATTTCCTGGCCATTTTGTTTTCCCTGGAGGCCATCCTGAGCCTCAAGAAATTGGTATAACATCCCATCAATATGTCAAGGAGTTAACGGAATCTATTGACATTAAGGTTTCACAGGAGATGTTTGACAGCATAGTTCGTGAAGTAGTTGAAGAAATTGGAGTGCCAGCTTCATCCCTTAGCATCCCGGTTTTCATTGGTATATCTCGCAGGGATTTGAATGTGAGACCGGCtgcatttttctttatcaaatgcAATCTTGACTCAAAGGAAGTTCAGCAGTTTTATTCTAGCGCACAAGATGGCTATGAATCAACTCAGCTATATGCTGTTCCAATGATTGAAGTAGAAAACATGACTTCTAGGATGCCTGGCTGTCATCGAGGTGGATTTGCTCTCTATAAATTAATGGTTGACACCAGGAAGATTACTTGA 906 0.4327 MEKDASGTSSPDPSSFKLLVSCPSGLSPSQVSVSFSDAYDRIPHSDVSLENTISEIWEQRSLKNNSLFNGKKFRYGGYVLDTGGGSDREPHLCLHLGLTDYRTFVGTNLSPLWERFLVPSEDDSVLCQHTSSPLGNGAVVETNDNKILVLQRSNNVGEFPGHFVFPGGHPEPQEIGITSHQYVKELTESIDIKVSQEMFDSIVREVVEEIGVPASSLSIPVFIGISRRDLNVRPAAFFFIKCNLDSKEVQQFYSSAQDGYESTQLYAVPMIEVENMTSRMPGCHRGGFALYKLMVDTRKIT 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2576 301 CDD Nudix_Hydrolase 134 251 - -
Ssu3g2576 301 ProSiteProfiles Nudix hydrolase domain profile. 131 296 IPR000086 -
Ssu3g2576 301 Pfam NUDIX domain 138 217 IPR000086 -
Ssu3g2576 301 PANTHER URIDINE DIPHOSPHATE GLUCOSE PYROPHOSPHATASE 11 299 - -
Ssu3g2576 301 SUPERFAMILY Nudix 135 222 IPR015797 -
Ssu3g2576 301 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 130 283 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2576 - - gmx:100809516 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2576 3 78752320 78756618 Ssu3g2576 3 78752320 78756618 ECH