Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2565 ATGGGCGGAGAGAGTGCTCTGAAATCCCGAGAGGTATCGGCGTTGATAAAGCAGGGTTTCATCCCCGACCCAACCTTCTCTTTCTCCCCTTCCAGAACCTTCTCCCCTCCTTCCCCCTCAACTCGCCCGAGTCACACTCACTCCCAGACTCACCCTCACACCCAGACCCTCTTCGACATGATGTCCGAGGAGCACAAATTCTCCGACGACAAGCGCCGCAAAATGCAAGATCGGGTCGCCAGACTCCTCGACGAACCCGCCCTgcgcggcggcggcggcggcgacgTCAGGGTCGCGGTGGTTGGGAGGGACGGCTTCAGGGTTTCGATGGAGGCGCACAAGAGCGTTCTCGCCGACAAGAGTCGCTTCTTCGCCGAGAGGTTTCGCTGCGACAGTGGCCTCTCCCACTCCGTGGAGATCAGTGACTGCGACGACGTCGAGGTCTACGTGGAGGCTGTCGTTTTGATGCATTGTGAGGATCTCAAGACGAGGTTGCGCTCCATGGGTGAAGGGGTTTCCAAGATTTTGAGCTTGCTCAAGGTATCAGCAGCTATCATGTTTGACCTTGGGGTTGTGTCATGCCTGGAATATTTGGAATCTATTCCGTGGACTGAGGATGAACAGGACGAAGTCATATCTCAGCTAGAACATCTGCAGCTTCATGACTCTGCAACCGAAGTTCTTCTTAGAGTATCATCTGATCCATCTACTGCTGATAGTGCTGATGACATCTTCTTGAACCTGCTAAGTGGTGTTCTACAAGCGAAAGACGACAAAGCTCGTAGGGAAATGAAAGCTCTGCTGTCTAGATTGCTTAAAGAGAATGCATCTAATGACAGCAGCAGACCTGATGTTTCTAAGGACACACTTTATCATCTTTGCCACAAGTGCATCAGTTCTCTTCTCCTATGCCTATCCGAAGCAACCGGCGGCAATGAGAGGCCGGACCGGGGGGTTATAATGAGTGACATAACTCGTGAAGCTGACAATATTAAGTGGATTGTTGACATTTTGATTGGCAAAAAGATGGGTGATGAATTTGTGAAAATATGGGCAGAACAGAAAGAGCTTGCTACACTTCATTCCAAGGTTCCAACAGTTTTCCGCCATGAGATCAGTAGAATCACGGCACAACTATGCATCGGCATTGGAAGGGGACACATACTGGTGCCAAAAGAAATTAGATTTTCCTTGTTGTCAACATGGCTAGAAGCTCTATATGAAGATTTTGGATGGATGAGGAGAGCTTCTAGAGCTGTTGATAAGAAATTGGTTGAGGATGGACTGAGCCAAACTATATTGACACTTCCTTTACTCCAACAACAGGCTGTGTTGCTGAATTGGTTTGATAGATTTCTTAATAAAGGAGATGACTGTCCTAATATTCAGAAGGCATTTGAGATTTGGTGGAGAAGGACCTTCATCAGACAGTATTCAGCCGAGCCTGATAATTCCCAGTTGCAAATAACTCTTTCTGATTACCCGAGCTGA 1491 0.4735 MGGESALKSREVSALIKQGFIPDPTFSFSPSRTFSPPSPSTRPSHTHSQTHPHTQTLFDMMSEEHKFSDDKRRKMQDRVARLLDEPALRGGGGGDVRVAVVGRDGFRVSMEAHKSVLADKSRFFAERFRCDSGLSHSVEISDCDDVEVYVEAVVLMHCEDLKTRLRSMGEGVSKILSLLKVSAAIMFDLGVVSCLEYLESIPWTEDEQDEVISQLEHLQLHDSATEVLLRVSSDPSTADSADDIFLNLLSGVLQAKDDKARREMKALLSRLLKENASNDSSRPDVSKDTLYHLCHKCISSLLLCLSEATGGNERPDRGVIMSDITREADNIKWIVDILIGKKMGDEFVKIWAEQKELATLHSKVPTVFRHEISRITAQLCIGIGRGHILVPKEIRFSLLSTWLEALYEDFGWMRRASRAVDKKLVEDGLSQTILTLPLLQQQAVLLNWFDRFLNKGDDCPNIQKAFEIWWRRTFIRQYSAEPDNSQLQITLSDYPS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2565 496 MobiDBLite consensus disorder prediction 21 52 - -
Ssu3g2565 496 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 10 495 - -
Ssu3g2565 496 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 10 495 IPR038920 -
Ssu3g2565 496 MobiDBLite consensus disorder prediction 24 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2565 Ssu-Chr3 78609724 78612240 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2565 - - gmx:100789358 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2565 3 78609724 78612240 Ssu3g2565 3 78609724 78612240 ECH