Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2554 ATGAGGAAATCGCAAGCGGATGAGAAGATTCTCAGCTACAATGATGTGGTGCTTAGACGATCGGATCTGGACATCCTTAGTGGTCCACATTATTTGAATGATCGAATTATTGAGTTTTATTTCAGCTATCTTTCTTCATGCCATCCCTCTCAGGATATCCTACTGGTTCCACCATCCATTGCATTTTGGATAATAAAATGCCCTGTCGCTGAGGCTCTCAGCGATTTCATAGAACCCCTTCATTTGCCTGATAAGACACTGGTTTTATTTCCCATCAATGACAATGATGATGTTGACAGAGCTGAAGGTGGTTCTCATTGGAGCTTACTTGCATATTACCGCAATGCTAATTTGTTTGTTCACCATGATAGTTGCCGAAGCATGAACACAGCCCCTGCCAAGCAACTCTATAAAGCTGTTGCTGGATACATGGGATTCCCTGGATCAGCTTCTGAGGCTAGCTTTCAGGAATGCACTAATTCACCCATACAAGAGAATGGTCATGACTGTGGCTTATATGCCACAGCCATAGCAAGAATAATATGTAACTGGCatgtaaatcataaaaatactgATACAAATGATCTGTGGTTCTCTGCTGTGAAGGAACAGGTTACTCCATCTGCTGTTGGCAGCATGCGAGGCGAGATCCTGGCCTTGATCAGAGATCTAATGGCAAGACATTGA 687 0.4236 MRKSQADEKILSYNDVVLRRSDLDILSGPHYLNDRIIEFYFSYLSSCHPSQDILLVPPSIAFWIIKCPVAEALSDFIEPLHLPDKTLVLFPINDNDDVDRAEGGSHWSLLAYYRNANLFVHHDSCRSMNTAPAKQLYKAVAGYMGFPGSASEASFQECTNSPIQENGHDCGLYATAIARIICNWHVNHKNTDTNDLWFSAVKEQVTPSAVGSMRGEILALIRDLMARH 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2554 228 Pfam Ulp1 protease family, C-terminal catalytic domain 31 182 IPR003653 GO:0006508|GO:0008234
Ssu3g2554 228 Gene3D Adenoviral Proteinase; Chain A 6 227 - -
Ssu3g2554 228 ProSiteProfiles Ubiquitin-like protease family profile. 16 181 IPR003653 GO:0006508|GO:0008234
Ssu3g2554 228 SUPERFAMILY Cysteine proteinases 7 225 IPR038765 -
Ssu3g2554 228 PANTHER SENTRIN-SPECIFIC PROTEASE 8 3 225 IPR044613 GO:0019784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2554 K08597 - gmx:100800268 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2554 3 78225654 78226340 Ssu3g2554 3 78225654 78226340 ECH