Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2539 ATGGCGTTCAGAGGGAAAGAGATGATGAAGAAAATTCTGAAGACAGTGGGAGAGAACGGCTTGAGTCGAAGAGAAAAGGACTCGTTGGAGAAATGCATACCTCGAAGCAAGGTCGTGATGAATCGCGCCAAACGCGGTCTCTTTGCTGGGCGACACATTCAGTTTGGCAATCGTGTCAGCGAAGATGGCGGTAACAAATCAAGGAGAACTTGGAAACCTAATGTCCAGGAAAAGCGGCTCTTTAGTTATATCCTAGATCGTCACGTTCGTGTTAAAGTCACCACCCATGCCCTACGGTGCATAGACAAGGCAGGTGGGATTGATGAGTACTTGCTGAAAACTCCTTATCACAAGATGGACACTGAAATGGGCATCCTTTGGAAGGCAAAGATTGAGAAGTTGTATGAAGAGCTTGGCAAAAAGGAGGTTGTATTCTTTTCACCAGAGGATGAAGCGAAGTTTGAACAGGACTTTAAAGATTTGAAACTATCTGAAAGGGAAGCACGAAAGGAGGTCAGAAGAAAAATGTACACTGGGATGAGCAAGCACAAGCTAATTGAGGTAGAACGTAAAGATGATCAGTCTATTGACGAGGGAGGCAAtaaaattgaggaagaaatCTCGCATGATTCATCAAAACAGGTGGTTCCTGTCTCGTATGTCTTAGCTCCTGACAAGCTCAAAGTTGGAAGTATTGTTTCTAATTAA 708 0.4322 MAFRGKEMMKKILKTVGENGLSRREKDSLEKCIPRSKVVMNRAKRGLFAGRHIQFGNRVSEDGGNKSRRTWKPNVQEKRLFSYILDRHVRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGILWKAKIEKLYEELGKKEVVFFSPEDEAKFEQDFKDLKLSEREARKEVRRKMYTGMSKHKLIEVERKDDQSIDEGGNKIEEEISHDSSKQVVPVSYVLAPDKLKVGSIVSN 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2539 235 Hamap 50S ribosomal protein L28 [rpmB]. 42 110 IPR001383 GO:0003735|GO:0005840|GO:0006412
Ssu3g2539 235 PANTHER BNAC03G67590D PROTEIN 1 184 - -
Ssu3g2539 235 MobiDBLite consensus disorder prediction 190 210 - -
Ssu3g2539 235 PANTHER 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL 1 184 IPR026569 GO:0003735
Ssu3g2539 235 Pfam Ribosomal L28 family 45 104 IPR026569 GO:0003735
Ssu3g2539 235 Gene3D Ribosomal protein L28/L24 47 118 IPR037147 GO:0003735
Ssu3g2539 235 SUPERFAMILY L28p-like 43 119 IPR034704 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2539 K02902 - gmx:102663308 447.203