Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2533 atggcttcttcttcttcttcgtcgtCGAAATCGAAGTTCAGTGTCTATCAAAACCCTTCTTTCTCCGCCGTTCTCACTTCCAACAGTATTCAACCTTCGAATTTCACGATCCTCTCCatcctctccttcttctctgCCTCCGCATTCGCCTTTCTCGCTATCATCTTCAGGGAAAACGGCTTCATCCACATTTTGAGCCTCGGAACTGTTTCCCCTGTCACAGCTTATTGGTTTGCCAAGACGCTACAAGCTTTAGTGGGTTTTATCTTCGTTGGAACTGTTTCTGCACTCATCAAAGTTGTGTTTATGCGTAGAGCTAGGTATGCTGGTGGTTTAGTTGCGGCTAAGAGCGTGTCTGATTCTAACACTGTTAATAGAACTGAGATTTTGCTAACCAAACATCAACTCGAGCTTTTAGGAGTGAAGCCAAAGGTTGATTTGGCTCAACCCGATTCGGCGAAGAAGCCCCCCAAGTCTAAGCCCCAGGTGCCTTCTTCAGATTTGCTGGTTCCCCTTCATCAGCCAATTCCCAGCCCCACTCGATCTCGCATTGATGCGGATGGTTCAAATTCTAATAGGGGTGCTGCTGCTCGTTCTGTTGGAACTCCCTCGAGGTCGCCAGGTTCGGCCTCATTGTATCTTGCACCGGGTTTATTTTCTCCCCCGAGGAGTTTGGCTGGAGTGGATTCGGTGGTTTCGAGCCCTTGGTCTAACAGGCGAGCCTCCTCTGCTAGTAAGATAACGTCGGAGGAAAAGCTGGAGAAATTCTTAGCCAAAGTGGATGAAAGGATCAATGAGTCGGCAGGGAAGATGTCTACCCCACCTCCTACGGTTCCTGGTTTTGGCGTAGTGAGCCCTAGTACAGTTACAGGCTCGGCTAATACGTCTGGAACTACAAGGCTTATGCCATTGAGGCCTGTGAGGATGTCTCCGGGCTCACAAAAGTTTAACACCCCCCCTAAGAAGGGTGAGGGTGACTTTCCTGCACCAATGTCCATGGAAGAATCTATTGAAGCTTTTGGACATCTTGGCATCTATCCTCAAATTGAACAGTGGCATGACCGACTCAGGCAATGGTTTTCTTCGGTTCTGCTCAAACCTTTGCTTAACAAGATCGAGACAAGTCACATTCAGGTTATGCAAGCAGCTGCTAAACTTGGTATTTCAATCACAATTAGTCAAGTGGGGAATGATATGCTGTCAACCGGAGCCCCTGCTGCTTTGCCATCAATTGATAAGACTCAAGACTGGCAACCTGCACTGTCTCTCAATGAAGATGGATTACTTCATCAGTTACATTCTACTCTTGTGCAGGCCATAGATTCTTCCAAATCCAAGTTGCTTGTATCTAATATGCAACAGTCCCCACAGCAGACTTCTTTAATTCCTATCATGCAGGATTGTGTGGATGCTATCACTGAACACCAAAGGCTTCAAGCCTTGGTTAAAGGAGAGTGGGTTAAAGGTTTGCTACCTCAAAGCAGTGTTCGTGCTGATTACACTGTGCAAAGGATCCGAGAGCTTGCAGAAGGAACCTGCTTGAAGAATTATGAGTATCTTGGAAGTGGGGAGGTTtatgataaaaagaataaaaagtggACACTTGAGCTACCTTCTGATTCTCACTTGCTGTTGTATCTGTTCTGTACTTTCCTAGAACATCCAAAATGGATGTTACATGTGGATGCTATGTCATATGCTGGAGCTCAGTCTGGCAAAAATCCATTATTCTTGGGAGTCCTTCCCCCAAAGGAAAGGTTTCCAGAGAAATACATTGCTGTAGTGTCTTCTGTCCCTTCTGTGCTACACCCTGGAGCATGTATACTAGCAGTTGGAAAGCAGGGTCCCCCGATTTTTGCCTTGTACTGGGATAAGAAACTGCAGTTTTCTCTTCAGGGAAGAACTGCGCTCTGGGATTCCATCTTGCTTCTGTACCATAAGATTAAGGTTGGTTATGGAGGTGTTATTAGGGGCATGCATCTAGGTACTTCAGCTTTAAGCATTCTCCCGGTTATGGAAGCAGAATCTGAAGATTAA 2037 0.4487 MASSSSSSSKSKFSVYQNPSFSAVLTSNSIQPSNFTILSILSFFSASAFAFLAIIFRENGFIHILSLGTVSPVTAYWFAKTLQALVGFIFVGTVSALIKVVFMRRARYAGGLVAAKSVSDSNTVNRTEILLTKHQLELLGVKPKVDLAQPDSAKKPPKSKPQVPSSDLLVPLHQPIPSPTRSRIDADGSNSNRGAAARSVGTPSRSPGSASLYLAPGLFSPPRSLAGVDSVVSSPWSNRRASSASKITSEEKLEKFLAKVDERINESAGKMSTPPPTVPGFGVVSPSTVTGSANTSGTTRLMPLRPVRMSPGSQKFNTPPKKGEGDFPAPMSMEESIEAFGHLGIYPQIEQWHDRLRQWFSSVLLKPLLNKIETSHIQVMQAAAKLGISITISQVGNDMLSTGAPAALPSIDKTQDWQPALSLNEDGLLHQLHSTLVQAIDSSKSKLLVSNMQQSPQQTSLIPIMQDCVDAITEHQRLQALVKGEWVKGLLPQSSVRADYTVQRIRELAEGTCLKNYEYLGSGEVYDKKNKKWTLELPSDSHLLLYLFCTFLEHPKWMLHVDAMSYAGAQSGKNPLFLGVLPPKERFPEKYIAVVSSVPSVLHPGACILAVGKQGPPIFALYWDKKLQFSLQGRTALWDSILLLYHKIKVGYGGVIRGMHLGTSALSILPVMEAESED 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2533 678 PANTHER UNCHARACTERIZED 4 677 IPR019176 -
Ssu3g2533 678 MobiDBLite consensus disorder prediction 147 208 - -
Ssu3g2533 678 MobiDBLite consensus disorder prediction 288 325 - -
Ssu3g2533 678 MobiDBLite consensus disorder prediction 183 208 - -
Ssu3g2533 678 Pfam Cytochrome B561, N terminal 12 673 IPR019176 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2533 - - gmx:100816099 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2533 3 77929110 77932409 Ssu3g2533 3 77929110 77932409 ECH