Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2514 ATGAGAACGACACAGATTCTGTTTGTTTTGCTTTGGTTCTTCGTTTATGCCCCTGCTTTGTTTTGCGCAAATGTCACGTATGACCACAGAGCATTGGTCATCGAGGGCAAGCGCCGAGTCTTGGTCTCTGGGTCTATTCATTACCCTCGTAGCAATCCAGAGATGTGGCCAGATCTCATTCAGAAATCCAAAGATGGAGGACTTGATGTGATTGAGAGTTATGTTTTCTGGAACTTACACGAACCAGTTCGAGGCCAGTATAATTTTGAAGGTAGGGGCGATTTGGTCAAATTTGTGAAAGCAGTAGCAGCAGCAGGTCTATATGTGCATCTCCGGATTGGTCCATACGCCTGTGCTGAATGGAACTACGGTGGTTTCCCTCTTTGGCTGCATTTCATTCCAGGAATTCAGTTCCGAACTGATAATGAACCATTCAAGGCAGAAATGAAGCGGTTCACTGCTAAGATTGTGGATATGATGAAGCAAGAGAACCTCTATGCATCACAGGGAGGACCTATTATTTTGTCTCagGTTGAAAATGAGTATGGGAACATTGATGCGGCCTATGGTCCTGCTGCTAAATCCTACATCAATTGGGCAGCATCAATGGCAACATCTCTTGATACAGGGGTTCCTTGGGTAATGTGCCAACAGGCAGACGCTCCTGATCCAATTATTAACACATGCAATGGATTTTACTGCGATCAATTCACACCAAACTCTAATGCAAAACCAAAAATATGGACTGAGAATTGGAGTGGGTGGTTTCTTTCATTTGGGGGGGCTGTGCCTTACAGACCAGTGGAAGATCTTGCTTTTGCTGTGGCACGCTTTTACCAGCGAGGTGgaacttttcaaaattactaTATGTACCATGGAGGGACTAATTTTGGCCGAACTACTGGTGGACCTTTCATTTCTACTAGTTATGATTATGATGCACCAATTGATGAATATGGAATTATTAGACAGCCTAAGTGGGGCCACCTTAAAGATGTGCATAAGGCCATAAAGCTTTGTGAAGAAGCACTGATAGCAACTGATCCAACTATTACAACTCCTGGACCAAATATAGAGGCTGCAGTTTACAAGACAGGAGCAGTATGTGCAGCCTTCCTTGCCAACATTGCCACATCTGATGCAACAGTGACCTTTAATGGAAATTCATATCACTTGCCTGCATGGTCTGTGAGCATCTTACCGGACTGCAAGAATGTAGTGCTTAATACTGCAAAGGTTTGTCAAAATAGGATAGTTCAATTGAATGAAATTAATTCTGCATCTATGATTTCAAGCTTCACAACTGAACCTTTAAAAGAAGAGGTTGGTTCTTTGGATGATTCTGGCTCAGGATGGAGTTGGATACGTGAACCTATTGGTATTTCAAAGGCTGATTCATTCTCAAAATTTGGATTACTGGAGCAAATAAATACAACTGCTGATAGAAGTGATTACTTGTGGTACTCATTGAGCATTGATCTTGAAGATGATGCTGGTGCTCAAACAGTTCTTCACATTGAATCCCTTGGTCATGCCCTTCATGCTTTCATAAATGGGAAGCTTGCAGGGAGCGGAACTGGCAACAGTGGCAAAGCTAAGGTCAATGTAGACATACCCATCACACTAGTGGCTGGGAAGAACAAAATTGATCTCCTGAGTTTGACTGTGGGACTTCAGAACTATGGAGCTTTTTTTGACACATGGGGTGCAGGGATCACTGGTCCAGTGATATTGAAAGGTTTGAAGAATGGAAGCAGTCTCGATCTCTCCTCCAAGCAGTGGACATATCAAGTTGGCCTTAAAGATGAAGATTTAGGTCCATCTAGTGGCAGTTCTGGACAGTGGAAGTCACAATCTACCTTACCCACAAACCAACCGTTGACTTGGTACAAGACAAACTTCGTTGCTCCCACTGGCAGTAATCCAGTTGCAATTGACTTCACGGGTATGGGAAAAGGTGAGGCTTGGGTGAATGGACAGAGCATTGGGCGATACTGGCCAACATATGTCTCTCCAAACGGTGGTTGTACTAACTCATGCAATTATAGAGGGGCCTATAGTTCATCCAAATGTCTCAAGAATTGTGGAAAACCATCACAGACATTATACCACGTACCACGATCATGGTTACAGCCTGATAGCAACACACTTGTATTGTTTGAGGAAAGTGGAGGCGACCCTACGCAAATCTCTTTTGCTACAAAACAGATAGGAAGCATGTGTTCACATGTATCTGAATCTCACCCTCCTCCTGTAGACCTGTGGAATTCAGATACAGAATCAGGAAGAAAAGTAGGGCCTGGTCTGTCACTGGAGTGCCCTTATCCTAATCAGGTGATCTCTTCCATTAAATTTGCAAGTTTCGGAACGCCTTATGGGACTTGTGGTAACTTCAAACATGGACGGTGCAGAAGCAATAAGGCTTTATCCATTGTGCGGAAGGCCTGCATTGGATCAAGCAGTTGTAGAATTGGACTATCAATTAATACATTTGGAGATCCATGTAAAGGAGTAGCAAAGAGTTTAGCTGTTGAAGCTTCTTGTGCATAG 2550 0.4318 MRTTQILFVLLWFFVYAPALFCANVTYDHRALVIEGKRRVLVSGSIHYPRSNPEMWPDLIQKSKDGGLDVIESYVFWNLHEPVRGQYNFEGRGDLVKFVKAVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIQFRTDNEPFKAEMKRFTAKIVDMMKQENLYASQGGPIILSQVENEYGNIDAAYGPAAKSYINWAASMATSLDTGVPWVMCQQADAPDPIINTCNGFYCDQFTPNSNAKPKIWTENWSGWFLSFGGAVPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFGRTTGGPFISTSYDYDAPIDEYGIIRQPKWGHLKDVHKAIKLCEEALIATDPTITTPGPNIEAAVYKTGAVCAAFLANIATSDATVTFNGNSYHLPAWSVSILPDCKNVVLNTAKVCQNRIVQLNEINSASMISSFTTEPLKEEVGSLDDSGSGWSWIREPIGISKADSFSKFGLLEQINTTADRSDYLWYSLSIDLEDDAGAQTVLHIESLGHALHAFINGKLAGSGTGNSGKAKVNVDIPITLVAGKNKIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLKNGSSLDLSSKQWTYQVGLKDEDLGPSSGSSGQWKSQSTLPTNQPLTWYKTNFVAPTGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYVSPNGGCTNSCNYRGAYSSSKCLKNCGKPSQTLYHVPRSWLQPDSNTLVLFEESGGDPTQISFATKQIGSMCSHVSESHPPPVDLWNSDTESGRKVGPGLSLECPYPNQVISSIKFASFGTPYGTCGNFKHGRCRSNKALSIVRKACIGSSSCRIGLSINTFGDPCKGVAKSLAVEASCA 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2514 849 SUPERFAMILY (Trans)glycosidases 25 341 IPR017853 -
Ssu3g2514 849 PRINTS Glycosyl hydrolase family 35 signature 247 262 IPR001944 GO:0004553|GO:0005975
Ssu3g2514 849 PRINTS Glycosyl hydrolase family 35 signature 111 130 IPR001944 GO:0004553|GO:0005975
Ssu3g2514 849 PRINTS Glycosyl hydrolase family 35 signature 304 320 IPR001944 GO:0004553|GO:0005975
Ssu3g2514 849 PRINTS Glycosyl hydrolase family 35 signature 284 299 IPR001944 GO:0004553|GO:0005975
Ssu3g2514 849 PRINTS Glycosyl hydrolase family 35 signature 56 74 IPR001944 GO:0004553|GO:0005975
Ssu3g2514 849 PRINTS Glycosyl hydrolase family 35 signature 168 183 IPR001944 GO:0004553|GO:0005975
Ssu3g2514 849 PRINTS Glycosyl hydrolase family 35 signature 625 639 IPR001944 GO:0004553|GO:0005975
Ssu3g2514 849 PRINTS Glycosyl hydrolase family 35 signature 35 52 IPR001944 GO:0004553|GO:0005975
Ssu3g2514 849 PRINTS Glycosyl hydrolase family 35 signature 652 668 IPR001944 GO:0004553|GO:0005975
Ssu3g2514 849 PANTHER BETA-GALACTOSIDASE 5 843 - -
Ssu3g2514 849 PANTHER BETA-GALACTOSIDASE RELATED 5 843 IPR001944 GO:0004553|GO:0005975
Ssu3g2514 849 ProSiteProfiles SUEL-type lectin domain profile. 763 849 IPR000922 GO:0030246
Ssu3g2514 849 SUPERFAMILY Galactose-binding domain-like 593 758 IPR008979 -
Ssu3g2514 849 Pfam Galactose binding lectin domain 771 848 IPR000922 GO:0030246
Ssu3g2514 849 Pfam Glycosyl hydrolases family 35 32 336 IPR031330 -
Ssu3g2514 849 Gene3D - 578 741 - -
Ssu3g2514 849 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 170 182 IPR019801 GO:0004553|GO:0005975
Ssu3g2514 849 Gene3D - 764 849 IPR043159 -
Ssu3g2514 849 Gene3D Glycosidases 20 340 - -
Ssu3g2514 849 SUPERFAMILY Galactose-binding domain-like 397 581 IPR008979 -
Ssu3g2514 849 Gene3D - 431 577 - -
Ssu3g2514 849 Pfam Beta-sandwich domain in beta galactosidase 344 413 IPR041392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2514 Ssu-Chr3 77589874 77596543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2514 19 702 Glycoside Hydrolase AT2G28470 75.253 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2514 - - gmx:100793198 1635.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2514 3 77589874 77596543 Ssu3g2514 3 77589874 77596543 ECH