Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2501 ATGAGTCCCATTGGCTTGtccttcctcttcctcctttctttAGCACTTCTGTCTATTGCTAGAGGCCAAGAAAGGGCCCCTCATGGGCTTGTTTACGAGAGCCCTCTAGCTTTTTCACCATCTGCATATGACTTCTTTCATCCCAATGCTCAAAAGCCTGAGACTAGAGACCCATGTACTGCATCCAAATGTTCACCACTGCCTCTAGCAGCTCAAGTGGATGCCACTCAAATATATGAAAACAAAGCTTCGGCAACGCAGAAAGGTGGGAAACAAATCGGAGCTGGGGGTGTAGCTGGCATTGTCACTGCCGTTGCTTTAGCTGCGCTTTTAGCTATGGGAATCTACTATGTAAAGGTCACTCGCCAAGCCAACATGTGTCGAGCCAATAATAGTGTTCAATCTCATGCTTGA 414 0.4469 MSPIGLSFLFLLSLALLSIARGQERAPHGLVYESPLAFSPSAYDFFHPNAQKPETRDPCTASKCSPLPLAAQVDATQIYENKASATQKGGKQIGAGGVAGIVTAVALAALLAMGIYYVKVTRQANMCRANNSVQSHA 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2501 137 PANTHER PROTEIN, PUTATIVE-RELATED 1 137 - -
Ssu3g2501 137 PANTHER EXPRESSED PROTEIN 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2501 Ssu-Chr3 77433891 77434304 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2501 - - gmx:100785093 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2501 3 77433891 77434304 Ssu3g2501 3 77433891 77434304 ECH
Ssu8g0566 8 9138270 9138689 Ssu3g2501 3 77433891 77434304 PCT