Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2472 ATGCGTGACCCCCGCCATCCATCACCCAAGCTGCGAGAACGCAATCCAGAGATGTATTTGGATCCCCCAACTAGATCACTACTGGATCCACTTTTGTCAGAAGAGACTGATCTGAAGTGGCAACCCAACAAGCTATCTGAGAGCATCATGAAGTGTTTGAATTTCATATATGTAAGACTCCTCAGAACATCAAGAGCAATGGAATTGGAGAAATCAGGGCCCATTTCCAGGTCTGTGCACTCTTCTTTAAGCTCAAGAAGCTTCAGGGTGGATCCTGGGTCAAACCCAAAACCAAGCCTCTTGTTGCAAAAGGAATCGAGGCAGCAAGACCCATATGGTATCTTTAACACAGAAGAGTCAATTCCAAGGGACATTGGTCCTTATAAGAACCTGGTTATATTCACCTCCAGCTCTATGGATCCCAAGTTCATCTCAAGTCCATCCTCTATACCATTATTGAGGAAGTTAAGGATCTTGATGAGCAATCTTCAAACAGTTGACTTGAAAAGCCTTACAAACCAACAGAAATTAGCATTCTGGATCAACGTGTACAATTCTTGTATCATGCATGGATTTATCCAATATGGTGTGCCATCCACCCCAGAAAAACTACTTGCTTTGATGAACAAGGCAACCCTCAACGTAGGAGGCAACATAATAAACGCTCAAGCAATAGAGCATTTCATATTGAGGAAACGAGATATTTCTGATGTGAAAGAgGCACAGCGAAAGGGTGAGTGGGAGGAGAAAGAATCGGTTGTCCGTGAACTTTATGGATTAGAGTTCATAGATCCTAATGTCACGTTTGCCCTGTGTTGCGGAACTCGTTCTTCTCCTGCTGTGAGGATATACACAGCAGATGGTGTTATATCTGAATTGGAGAAATCAAAACTAGATTACCTTCAGGCTTCAATTCTAGCTACTAGCACCAAAAGGATAGCGTTCCCAGAGCTCCTTCTCAGAAACATGCTTGATTTTGCGGCAGACACAGACTCGCTGGTGGAGTGGGTGTGCAACCAGTTACCTACATCTGGGACTCTAAGGAAATCAATGGTGGATTGCTTTAGAGGCCACAGTAATGTCAAGGCTTCTACCATTGTTGAAAAGATACCCTACGACTATGAATTCCAGTATTTgttgacaatataa 1149 0.4291 MRDPRHPSPKLRERNPEMYLDPPTRSLLDPLLSEETDLKWQPNKLSESIMKCLNFIYVRLLRTSRAMELEKSGPISRSVHSSLSSRSFRVDPGSNPKPSLLLQKESRQQDPYGIFNTEESIPRDIGPYKNLVIFTSSSMDPKFISSPSSIPLLRKLRILMSNLQTVDLKSLTNQQKLAFWINVYNSCIMHGFIQYGVPSTPEKLLALMNKATLNVGGNIINAQAIEHFILRKRDISDVKEAQRKGEWEEKESVVRELYGLEFIDPNVTFALCCGTRSSPAVRIYTADGVISELEKSKLDYLQASILATSTKRIAFPELLLRNMLDFAADTDSLVEWVCNQLPTSGTLRKSMVDCFRGHSNVKASTIVEKIPYDYEFQYLLTI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2472 382 MobiDBLite consensus disorder prediction 1 24 - -
Ssu3g2472 382 PANTHER EXPRESSED PROTEIN 1 382 - -
Ssu3g2472 382 MobiDBLite consensus disorder prediction 1 19 - -
Ssu3g2472 382 Pfam Protein of unknown function, DUF547 169 301 IPR006869 -
Ssu3g2472 382 PANTHER TRANSPORTER, PUTATIVE-RELATED 1 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2472 Ssu-Chr3 76657020 76659614 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2472 - - gmx:100809848 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2472 3 76657020 76659614 Ssu3g2472 3 76657020 76659614 ECH