Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2453 ATGGAGCCTGACAGGTTAAATTCCCCAACCACATTTGAGATGCAGTTGGAGGTTTTGGGCCACGAGTTGCAGTTTTCTCAGGATCCCAATTCCAAGCACTTAGGGACTACAGTATGGGATGCGTCACTTGTGTTTGTCAAGTTTCTTGAACGGAATTGCAGAAAGGGAAGGTTTTCCCCAgctaaacttaaaggaaaacGTGTAATTGAACTAGGAGCTGGCTGTGGAGTTTCTGGTGTTgGCATGGCTTTGCTTGGGTGTGATGTTATAGTGACAGACCAAAAGGAGGTTTTGCCATTGTTACAGAGAAATGTTGAGCGTAATATTTCAAGGGTCATGCAAAAGAATCCTGAGTCATTTGGTTCAATCAAGGTTGCTGAGCTTAAGTGGGGAGATGAGAGTCACATTAAGGCTGTTGGTCCTCCATTTGACTACATTATTGGCACTGATGTTGTTTATGTAGAGCATCTATTGGAGCCTCTATTACAAACAATACTTGCTTTATCTGGACCTAGGACTACAATATTGTTGGGCTATGAGATCCGCTCCACGAGTGTCCATGACAAGATGCTTCAGATGTGGAAAAGAAACTTTGACGTGAAGACTGTCTCGAAGTCCAAGATGGATGAAACATTTCAACATCCAAGTATTCAACTCTTCATTATGGGATTTAAACATTCAGCAGAGTGCACAGAGAACTCAGGTCAGGCTACTGTTGAAAAAGTTGATGTTGAAACTGGTGTGGAGGATAAAGGCAGTGGTGAGGGAAATGTTATAGTAGAAGGATCTGGTTCTGTTGAAGAAAATGTTGAGGATCACAGTAAGCTAATCTCGCAAAATGCAAGGCTTAGTGAGTGGGAAGCTAGAAGGTATGGAGCAATGGCTGCAAGGATTTTGCGAGATGTAAAAATATCCTGA 918 0.4172 MEPDRLNSPTTFEMQLEVLGHELQFSQDPNSKHLGTTVWDASLVFVKFLERNCRKGRFSPAKLKGKRVIELGAGCGVSGVGMALLGCDVIVTDQKEVLPLLQRNVERNISRVMQKNPESFGSIKVAELKWGDESHIKAVGPPFDYIIGTDVVYVEHLLEPLLQTILALSGPRTTILLGYEIRSTSVHDKMLQMWKRNFDVKTVSKSKMDETFQHPSIQLFIMGFKHSAECTENSGQATVEKVDVETGVEDKGSGEGNVIVEGSGSVEENVEDHSKLISQNARLSEWEARRYGAMAARILRDVKIS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2453 305 Pfam Lysine methyltransferase 21 186 IPR019410 -
Ssu3g2453 305 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 1 247 - -
Ssu3g2453 305 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 1 247 IPR019410 -
Ssu3g2453 305 CDD AdoMet_MTases 67 181 - -
Ssu3g2453 305 Gene3D Vaccinia Virus protein VP39 9 229 IPR029063 -
Ssu3g2453 305 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 62 180 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2453 Ssu-Chr3 76220608 76224394 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2453 K21806 - gmx:100780448 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2453 3 76220608 76224394 Ssu3g2453 3 76220608 76224394 ECH