Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2449 ATGGAGAAGGTGATGAACATTCTGAAGCCGAAGCCAAATCCGCAGCAATTATTGAGAGATTGGCAGCGAAGGCTCCGCCAAGAGTGTCGCAACATTGAGCGTCAAATTCGCGATATacagagagaagaaaagaatgtGCAGAAGGCGATTAGAGAAGCTGCAAAGAGGAATGACATGGGCTCTGCAAAgGCACTTGCTAAGGAACTTGTGAGATCTAGGAAAACAGTGAACCGTCTTTATGAAAATAAAGCACAAATGAATTCAATATCAATGCACCTTGGAGAGAGTGTTGCAATTGCTCGTACTGTGGGACATCTATCAAAGAGTGCCGAGGTTATGAAGCTTGTCAATAACCTCATGAAGGCTCCTGAAATGGCTGTGACAATGCAAGAGTTCAGCAAAGAAATGACAAAGGCAGGAGTTATTGAGGAGATAGTAAGCGATGCTGTTGACACAGCGCTAGATTCTGAGGACATAGAAGATGAGATAGAAGAAGAAGTCGATAAAGTCTTGACCGCAATAGCTGGCTGA 531 0.4237 MEKVMNILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALAKELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAVTMQEFSKEMTKAGVIEEIVSDAVDTALDSEDIEDEIEEEVDKVLTAIAG 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2449 176 Pfam Snf7 21 174 IPR005024 GO:0007034
Ssu3g2449 176 Coils Coil 18 59 - -
Ssu3g2449 176 Gene3D - 9 176 - -
Ssu3g2449 176 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 176 IPR005024 GO:0007034
Ssu3g2449 176 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 1-LIKE ISOFORM X1 3 176 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2449 K12193 - gmx:100797244 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2449 3 76159373 76163557 Ssu3g2449 3 76159373 76163557 ECH