Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2431 ATGGCTTCAGCATTATCTTCTCTCTCCTCCACCTCTTCTTCACTCTTCTTGCAGCACACCTTCACCGGAAACTCGAAGGCTCCTACTCAATTCCCCAACAAAACTGCGCGCTTTTTGGTCTTCGCTCAAAAGAAGGCAAAGAAAATTCGAAAGATTATTTTGAAGGAAGATGTGGCTAATGTGGGAAAGCAAGGGCAACTTCTTGATGTGAGGGCTGGCTTTTTCAGAAATTACCTGTTTCCTATGGGAAAGGCACAACTTGTTACTCCTCAGCTGCTCAAGGAAATGaagatagaagaagaaagaattgaGGCTGAGAAAAGACGGGTAAAAGAAGAGGCACAACAACTTGCTCTAATTTTTGAAACTGTTGGGGCTTTCAAGGTGAAGCGTAAAGGCggtaaaggaaaacaaatttttgGAAGTGTCACTGCTCAAGATCTTGTTGACATAATCAAGGCACAACTTCAAAGGGAGGTggacaagagaattgttgatCTTCCGGAGATCCGGGAAACAGGAGAATATATTGCAGAGTTAAAGCTTCACCCAGAAGTTACAGCTAGAGTGAGGACTTCAAGCTTCAGGCAGTCTGTAGTCTTGTAA 606 0.3993 MASALSSLSSTSSSLFLQHTFTGNSKAPTQFPNKTARFLVFAQKKAKKIRKIILKEDVANVGKQGQLLDVRAGFFRNYLFPMGKAQLVTPQLLKEMKIEEERIEAEKRRVKEEAQQLALIFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQREVDKRIVDLPEIRETGEYIAELKLHPEVTARVRTSSFRQSVVL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2431 201 Gene3D - 111 193 IPR036791 -
Ssu3g2431 201 SUPERFAMILY L9 N-domain-like 51 106 IPR009027 -
Ssu3g2431 201 Pfam Ribosomal protein L9, N-terminal domain 51 96 IPR020070 -
Ssu3g2431 201 TIGRFAM L9: ribosomal protein bL9 51 190 IPR020594 GO:0003735|GO:0005840|GO:0006412
Ssu3g2431 201 Hamap 50S ribosomal protein L9 [rplI]. 50 197 IPR020594 GO:0003735|GO:0005840|GO:0006412
Ssu3g2431 201 Gene3D - 51 110 IPR036935 -
Ssu3g2431 201 SUPERFAMILY Ribosomal protein L9 C-domain 109 191 IPR036791 -
Ssu3g2431 201 PANTHER 50S RIBOSOMAL PROTEIN L9 1 194 IPR000244 GO:0003735|GO:0005840|GO:0006412
Ssu3g2431 201 Coils Coil 93 120 - -
Ssu3g2431 201 ProSitePatterns Ribosomal protein L9 signature. 62 89 IPR020070 -
Ssu3g2431 201 PANTHER 50S RIBOSOMAL PROTEIN L9, CHLOROPLASTIC 1 194 - -
Ssu3g2431 201 Pfam Ribosomal protein L9, C-terminal domain 112 191 IPR020069 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2431 K02939 - gmx:100500390 296.204