Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2396 ATGGCAAACTCGAAGAACCACCGTAACGGCCAGGGCGAGCCTCACCGGCGGGGGATGTTAGCGCAGAAATCGTCGTCCTTTTACGGTCACTCGTCGGCGGCCATGTCCGGGGCCCAAATCCGGCGCCCGAGGACGGTGCCGGACCTCCTGTCGCGGAACCACGCGGCGGAGTCTGCGGCGGAGGTTGTGCCGAGACAGCCGCCGAAGTTGTTGCTGAAGGTGACGACGATGGGAAGCCTGGGACCGGTGCAGGTGGTGATGACGCCGGAATCGACGGTCGGAGACTTGGTGGCGGCGGCGGTGCGCCAATACGTGAAGGAAGGTCGCCGACCAATTTTGCCGTCCAACGACCCTTCCCACTTCGACCTCCATTATTCTCAATTCAGCTTAGAAAGCTTGGATAGGGAGGAGAAGCTGAGGGATATCGGATCTAGAAACTTCTTTCTGTGTCCGAGGAAGTGTGGTAGCGGCGACGGTAGCGCAACGACGCCGTTTGGCTCGTGTTCGAGAGAGGCTGATCAAGCAAGCAagcgtggtggtggtggtgcgtTTGGTTGGCTAAGCGAACGTATTACTTTAGCTAAGATCTGTGGTTCGTCGGCCACCGCAATCCTCCGCACGGCATCACGAGTTCTCTCCGGTGTCGCAACACCTCTGCCACCCACCGCGACTCCCCGCACGCCTTCGCGAGCTCTCGTCGGTATTGCAAAACATCGCGCCGTTTTTCGAGAGCCTCCGCAGCTCTGTTACCAGTGTAGTGGACGTTCCCGTCCCTCCTCGCACCCTAGTGACACGACATTTCACTCCATCGTCGTCAACCATTGCTGCACGAGCATGGTTCCTCGTCGTGGCTGCGACGCGAAATTTAGGCTCATCCGCTGGTGCCacaactctttctctctcccggGCATAGGGAGCTCATTTGGAAAATTGAATGGTGGGTACAGGAGGGGTTTACCCCCTTTCTTCGAGGCCCGAACACGCTAA 987 0.5633 MANSKNHRNGQGEPHRRGMLAQKSSSFYGHSSAAMSGAQIRRPRTVPDLLSRNHAAESAAEVVPRQPPKLLLKVTTMGSLGPVQVVMTPESTVGDLVAAAVRQYVKEGRRPILPSNDPSHFDLHYSQFSLESLDREEKLRDIGSRNFFLCPRKCGSGDGSATTPFGSCSREADQASKRGGGGAFGWLSERITLAKICGSSATAILRTASRVLSGVATPLPPTATPRTPSRALVGIAKHRAVFREPPQLCYQCSGRSRPSSHPSDTTFHSIVVNHCCTSMVPRRGCDAKFRLIRWCHNSFSLPGIGSSFGKLNGGYRRGLPPFFEARTR 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2396 328 PANTHER BNAC05G50380D PROTEIN 1 188 IPR040358 -
Ssu3g2396 328 PANTHER EXPRESSED PROTEIN 1 188 - -
Ssu3g2396 328 MobiDBLite consensus disorder prediction 160 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2396 Ssu-Chr3 75208556 75214581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2396 - - gmx:100792165 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0655 8 10767629 10768618 Ssu3g2396 3 75208556 75214581 PCT