Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2387 ATGTTTTTGGTGGTAAGACCGTGTTGTTCTTCCGTGCGTATTCATCATGTGCACCCCACGCGGCGCCGTAGCAGAAACGTCGTCGTTAGATGCTCCTTGAGCAGCGTGCAGGAGATAGAAAAGACGAGTGAACTGGATTCGGAGCTGGAGGCTTCGCTGGCATTCCCTCCGATCAGGGCGGCGAAGAGGGTGGTTCTGGTGAGGCACGGGCAGAGCACGTGGAACGCCGAAGGGAGGATCCAAGGAAGTTCCAATTTCTCGGTTCTGACGAAGAAAGGGGAGTCCCAGGCCGAGACTTCGCGCCAAATGCTCATCGATGACCACTTCGATGCCTGCTTTGTcagTCCTTTGGCTCGATCCAAGAAAACCGCTGAAATCATTTGGGGACCTCGCCAGGAACCCATCATTCCCGACTTTGACTTGAGGGAAATCGATTTGTACTCCTTTCAAGGTCTGCTGAAGCATGAAGGTAAAGCGAGATTTGGTTCTGCTTATCGTCAATGGCAGGTGGATGCTGCGAATTTCATCATTGATGGTCATTATCCTGTTAGAGAATTGTGGGAACGTGCTAGAAGCTGCTGGACTAAAATCTTAGCTCATGATAGCAGGTTTGGGGGCCGAGTATTTCAGAACATTACTTCAGAGCAATTGTGGTGTTAG 660 0.5061 MFLVVRPCCSSVRIHHVHPTRRRSRNVVVRCSLSSVQEIEKTSELDSELEASLAFPPIRAAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDHFDACFVSPLARSKKTAEIIWGPRQEPIIPDFDLREIDLYSFQGLLKHEGKARFGSAYRQWQVDAANFIIDGHYPVRELWERARSCWTKILAHDSRFGGRVFQNITSEQLWC 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2387 219 Gene3D - 60 210 IPR029033 -
Ssu3g2387 219 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 66 75 IPR001345 GO:0003824
Ssu3g2387 219 SMART PGAM_5 63 217 IPR013078 -
Ssu3g2387 219 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 34 203 - -
Ssu3g2387 219 CDD HP_PGM_like 63 143 IPR013078 -
Ssu3g2387 219 SUPERFAMILY Phosphoglycerate mutase-like 62 201 IPR029033 -
Ssu3g2387 219 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 34 203 - -
Ssu3g2387 219 Pfam Histidine phosphatase superfamily (branch 1) 64 201 IPR013078 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2387 K22200 - gmx:100798495 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2387 3 75068987 75071094 Ssu3g2387 3 75068987 75071094 ECH