Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2358 ATGGGAAAACGAGAGAAGCAGAAGCAGAGGCATGAGAGGGGTCACCGTGGAAGAGGCTCTTTCAACTATCTTCAAGAGGACCATGATTTTGATGACACTGCTCCCTTCTCTTCTACTCCAGAACTTTCACCCTCTGATGAATTCGAAGAAGGTGTTGATGATAGcaatgaggaagaagaagatgaagatgaagcagaaaaaagttatgaaaaccAATCACATGATATGCCTTCCAAGTTTCTCCTTTACCAACAATCTGTGCAGTCTCCCAAAGGAGACATAAGTTATATGCAAAAGTTCTTTCTCATGTACGTGGGTGGAAGGATGCCCTTCCATCTTCAAGAAGATTTCTGTGGCACTGCCTTTCTTAGTGCAGAATGGCTCCGCAGTGATCCAAGAAGGACAGCAGTAGGATTAGATTTGGATCTTGAGGCACTCAATTGGTGCATGGAGAACAACATACCTAAACTTGGGGCTGATGGATTTTCAAGAATATCCCTCTTTCATGGAAATGTCCTACAACCTCTTCAGTCTAAACTTGTGAAAATGGATCCTCAGGAGCTGTTAAGCAACATTTCACTGTCACAGAATGGAGAAAATCTGCAGACTGGTGTGCCAGAATCTGATACTCTGACAGGCCCTGCTGCTCAAGATGATAAGTTTACCAAGAGAAACATAACACTGCCTGGAAGAGATATTGTGTGTGCTTTTAACTACAGCTGCTGTTGTCTACATAAACGAGCAGATCTTGTTCTGTATTTCAAGCATGCTCGTGATGCCTTGTCAACTAAAGGTGGAATTTTTGTGATGGATTTATATGGGGGTACGTCTTCAGAGCACAGGTTGAGGCTTCAGAGAAGATTTCCTAATTTTACGTATGTATGGGAGCAAGCTGAATTTGATATTATTCAACGGAAGACAAGGATTAGCCTCCATTTTCATATGAAGAAGGAACAGAGAAAACTTCGTCATGCATTTTCATACAGCTGGCGGCTGTGGACATTGCCTGAGATTAGGGATTGCCTAGAAGAGGCTGGATTTCGGTCTGTTCACTTTTGGGTTCGAGAGATGCCAGACACCACAGAAATGATGAGAACAGAGGGATTTGGTGCGGGAAAGAATGTAAAATATGAAGAGGCAACAAGTTTTCAGCAACAAGATTCTTGGAATGCTTACATAGTTGGTGTTGCATAG 1194 0.4112 MGKREKQKQRHERGHRGRGSFNYLQEDHDFDDTAPFSSTPELSPSDEFEEGVDDSNEEEEDEDEAEKSYENQSHDMPSKFLLYQQSVQSPKGDISYMQKFFLMYVGGRMPFHLQEDFCGTAFLSAEWLRSDPRRTAVGLDLDLEALNWCMENNIPKLGADGFSRISLFHGNVLQPLQSKLVKMDPQELLSNISLSQNGENLQTGVPESDTLTGPAAQDDKFTKRNITLPGRDIVCAFNYSCCCLHKRADLVLYFKHARDALSTKGGIFVMDLYGGTSSEHRLRLQRRFPNFTYVWEQAEFDIIQRKTRISLHFHMKKEQRKLRHAFSYSWRLWTLPEIRDCLEEAGFRSVHFWVREMPDTTEMMRTEGFGAGKNVKYEEATSFQQQDSWNAYIVGVA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2358 397 Gene3D Vaccinia Virus protein VP39 117 392 IPR029063 -
Ssu3g2358 397 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 360 IPR029063 -
Ssu3g2358 397 MobiDBLite consensus disorder prediction 1 15 - -
Ssu3g2358 397 MobiDBLite consensus disorder prediction 1 74 - -
Ssu3g2358 397 MobiDBLite consensus disorder prediction 16 34 - -
Ssu3g2358 397 MobiDBLite consensus disorder prediction 46 66 - -
Ssu3g2358 397 PANTHER EXPRESSED PROTEIN 1 397 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2358 - - gmx:100790563 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2358 3 74546758 74550011 Ssu3g2358 3 74546758 74550011 ECH