Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2357 ATGGCGCGAGTGAACTTGGATGGAAACCCGATCCCGATGCTGGCGATTTGCATGATCGGCGGCGGCGGGTTTATCGGATCGCACCTCTGCGAGAAGCTGATGGCGGAAACCAACCACAAGGCCGTCGTCGTCGACGTCTCGTCAGAGAAGATCAACCACCTCCTCGACAAGTCCCTCCCCTGGGCACACCGCATCGAGTTCCACCAAATGAACATCAAGAGCGATTCCCGCCTCGAAACACTCGTCAAAGCATCCGATCTTACAATAAATCTTGCTGCAATTTGCACGCCGGCAGATTACAACACGCGCCCGTTGGACACCATCTTTAGCAACTTCATTGATGCGATTCCGGTGATTAAATATTGCACTGAGAACAATAAGCGTTTGATCCATTTTTCTACGTGCGAGGTTTACGGGAAGACTATAGGTAGCTTTCTCCCAGAGGAATATCAAAAGGACCCCAAATATTTCATGCTCAAGGAAGATGTCACTCCTTGTATTTTTGGTCCGGTTGAGAAACAGAGATGGTCTTATGCTTGTGCAAAGCAAATGACTGACAGGCTAATATATGCTGAGCACGCGGAGAATGGCCTCAAGTTCACCATTGTGAGACCATATAACTGGATTGGCCCAAGAATGGACTTCATTCCTGGTGTGGATGGTCCAAGTGATGGTGTCCCCAGAGTCTTGGCATGCTTCAGTAATAATCTCCTGCGCGGCGAGCCCCTCAAACTTGTTGATGGTGGGGGATCACAGAGAACCTTTCTCTACATCAAAGATGCAATTGATGCTGTTGTGTTAATGATTGACAACCCTGAGAGAGCAAATGGGCAGATCTTTAATGTGGGAAACCCAGATAATGAAGTAACTGTGAAGGAACTGGCTGAGCTTATGATAAAGGTTTATGCAAAGGTGTCTGGTGTACCTGCCTCTAGTCTATCAACTCTAAATGTGAGTTCAGAGGAATTCTATGGTAAAGGCTATGATGACAGTGATAGGCGCATCCCTGATATGACAATTATCACCAGGCAGCTTGCTTGGAAGCCAAGAACACCTCTTGATGAACTGTTGGATGTTACCCTCCGACATCAACACCGGACATATTCTCGTGCTATCGAGAAAGAACTTTCAAAACCGTCAAATTGA 1146 0.4721 MARVNLDGNPIPMLAICMIGGGGFIGSHLCEKLMAETNHKAVVVDVSSEKINHLLDKSLPWAHRIEFHQMNIKSDSRLETLVKASDLTINLAAICTPADYNTRPLDTIFSNFIDAIPVIKYCTENNKRLIHFSTCEVYGKTIGSFLPEEYQKDPKYFMLKEDVTPCIFGPVEKQRWSYACAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGGSQRTFLYIKDAIDAVVLMIDNPERANGQIFNVGNPDNEVTVKELAELMIKVYAKVSGVPASSLSTLNVSSEEFYGKGYDDSDRRIPDMTIITRQLAWKPRTPLDELLDVTLRHQHRTYSRAIEKELSKPSN 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2357 381 Gene3D - 15 372 - -
Ssu3g2357 381 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 381 - -
Ssu3g2357 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 365 IPR036291 -
Ssu3g2357 381 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 1 381 - -
Ssu3g2357 381 Pfam NAD dependent epimerase/dehydratase family 16 283 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2357 Ssu-Chr3 74543007 74546121 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2357 K12449 - gmx:100790039 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2357 3 74543007 74546121 Ssu3g2357 3 74543007 74546121 ECH