Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2356 ATGAAAGGCATCGTTCGCCCCCTCTTCGCGCTCCTCCTCTTCCTCGTCTTCGCCGCCACGCTATCCTCACGCGCCATCCTCCGCCGCGGCATTCTCTCCATCGAGCCCGAATCCCGCGTCCGGATCCGCCGCCGCCCTCCGCCGCTCAACGCCACGCTCCTCCACCACGCCGCCGTCGAAATTGGCGAGGAAAAGTTCAAGCACGAGATCCAGCAGCTCCTCGACGGCAACTTCGGCAGCCACGCGCACCACCGCACCTTCGTCTCCTGGCGCCGCTTCATCCACAACGACCGCAGGTCCGCCGGCGCCGGCGCCGGCTCCACCGCCAACCTCCCGGCGACTCTCCGGTCGCCGCTCTTCTACCGGTACTGGCTCGACTTCCGGAAGGTTCTCCACGACTGGTTCCGGAAGCGACGATTCCAACCCGGTGTCATGTCCGAGTTGACTCGGTCAATTAAGCTTCCAATTGATTCACACAACAAAGTATTAACCACTGAAAAGAAATACTCATCTTGTGCCGTTGTTGGAAACAGTGGAATTTTGCTGAACAGGGACTATGGAAGTTTGATTGATTCGCATGAGGCTGTGATAAGGTTGAACAATGCTAGGGTTGATCGCTTTGAAACCAAGGTTGGGAAGAAAACTAGCATTTCGTTTGTGAATAGTAACATTTTGCATTTGTGTGCAAGGAGAGCAGGGTGTTTTTGCCACCCTTATGGTGATCGTGTTCCGATTGTTATGTACATTTGTCAACCCGTGCATTTCCTGGACTACAATGTGTGCAATGCTTCTCACAAGGCTCCTTTGTTGGTCACTGATCCTAGGTTTGATGTGTTGTGTGCGAGGATTGTGAAGTACTATTCGTTGAAGCGGTTTGTGGAGGAGAGTGGGAAGGGTTTGGAGAAGTGGGGTGAGGCTCATGATGGGGCTCTTTTTCATTACTCCTCTGGGATGCAGGCTGTGATGCTGGCTTTGGGGGTTTGTGATAGGGTTAGCATTTTGGGTTTGGGAAATCGGCTTCTGCTAAGCACCATTACCATACGAACCAGAAGGCTGAGCTTCACTTGCATGATTATGAGGCTGAGTATGCGTTTTACAGGGACCTTGTGGATGGGAAGAGGCCGATACCCTTTCTCGAGGATAGGTTTAAGGTTCCTCCTGTTGTCATGTATTAATGATGGATGCTGTAACTGCTGCTGCAAGTGGTGGAGGGTGTCTATGGATTGTTCTGTTATTGTAATACTTGTGAAATGCACAGGTAGTGGAAAGGAAAATACCGATTCAAGATTCGTTTTTGTGTTGTATTGTTCCCACATGAAGCCTCAAGGCAACACCAAGTGTAAATTTTGGTTAGATCAATACAGCTTTGACCAGTCAATGATTAAGCATGTCCGTCTGTGA 1401 0.5103 MKGIVRPLFALLLFLVFAATLSSRAILRRGILSIEPESRVRIRRRPPPLNATLLHHAAVEIGEEKFKHEIQQLLDGNFGSHAHHRTFVSWRRFIHNDRRSAGAGAGSTANLPATLRSPLFYRYWLDFRKVLHDWFRKRRFQPGVMSELTRSIKLPIDSHNKVLTTEKKYSSCAVVGNSGILLNRDYGSLIDSHEAVIRLNNARVDRFETKVGKKTSISFVNSNILHLCARRAGCFCHPYGDRVPIVMYICQPVHFLDYNVCNASHKAPLLVTDPRFDVLCARIVKYYSLKRFVEESGKGLEKWGEAHDGALFHYSSGMQAVMLALGVCDRVSILGLGNRLLLSTITIRTRRLSFTCMIMRLSMRFTGTLWMGRGRYPFSRIGLRFLLLSCINDGCCNCCCKWWRVSMDCSVIVILVKCTGSGKENTDSRFVFVLYCSHMKPQGNTKCKFWLDQYSFDQSMIKHVRL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2356 466 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 1 338 - -
Ssu3g2356 466 Gene3D Glycosyl transferase family 29 55 343 IPR038578 -
Ssu3g2356 466 Pfam Glycosyltransferase family 29 (sialyltransferase) 147 338 IPR001675 GO:0006486|GO:0008373
Ssu3g2356 466 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 1 338 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2356 167 221 Glycosyltransferase AT3G48820 36.364 6.69e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2356 K00786 - gmx:100789506 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2356 3 74529815 74531215 Ssu3g2356 3 74529815 74531215 ECH