Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2352 ATGTTGAGTTCTGGGAATAACTTGAACAGTAGCAGCAGCAGCGGGATAACTTCTTCGGATATGCCACCCTTGCCCCAGTGTTTGGCACTAGATTCAATTACAGTAGGCAATAGAAAATATACAGGAGAACTAAGGAGGGTTCTTGGTGTTTCTGCTGGAAACACATCTGAAGATCATTCTTTTGGAGGTCCACATCTTAAACCCATGGCTCCTGGAGCCTCAGGGGAACTAAAGAACTTCAAAGAAAGTGTACAAGTTGCCTCCAGAAAGGCAAGGGATAGATCAAAAATGTTTGGGGAATCTTTGTCTAAATTGGAAAAGTACGAGGCATTAAACATAAAGAAGCGACAAAGGACTGACTTATCAAGTGATAGGGGAGGTGGAGTAAACTTGACAAAGATGGGTAGCCAGATTCACAAAACCCCTAATGATAATCTAACTCAGAGATCAGAAGCAAGGGCCTCAAATTCAATGCTGAACAAGCGAATTCGTACGTCAGTGGCTGATGTGCGGGAGGAAAGTAGGTCTGCTGCTATTGGAAGGCCACGGATGGCCACAGAGAAGGATGGAAATCTGGTCCAGACACTTGGTGGGAGCTCTGTTCGAAATGAAGAGAAAACTCGCAGATTACTTGCTAGAGGTGAAGGGTTggatcaaaaaataaagaagaagaggTCTGTTGGAACTGTAGGAAACAGAGTCATAACTGGTGAAAGGGATGTAAAACGAACTGCTCTTCCGAAGGCAAATGCTGATTTGAAGATGCGACTTTATGATGCTCAGGGTTTCagATTGAAGTCACTTCCTGGATCGGGTGGAATGAAGTCTGAGGGCTCTTCAGAGCTTACTAATACAGGTGCGCGCATGATGCTTACAAGTGAGCAAGGTGTTTCTCTTCACAGGGACCACGTAGCTGAGCAGAGAGTTGTAGCAAAAGGAAACAACAGGGCAAACTCTCAGGAGGACCCAACAAGCAGCCCTAACACACTAATAAAAAACAAGGTATCTCGGGCACCAAGAACTGGTTCAGTTAGTGCACTAGAATCATCAAACGTTCAACCTTCATCTACAACTTTTCCGGGTTCTTCTATACATCCAATGACTCAGTGGGTTGGTCAGAGGCCACCAAAAAATTCACGCTCACGAAGAGTGAAAGTAGTTTCTCCTGCCTTATGCAATCTTGAAGTTCAGGTCTCATCCGAAGGCTGTCTAACTTCTGATTTCAGTGTTAAAGCTTCTTCTGCTGGCAACAGTGGATTTCAACTGGCAAGCAGTGTAGACAACAGTActccaaaatataaaagaccACCTGATGACATTTCATCTCCCTTTGGATTATCTGAAAGTGAAGAATCTGGCGCTggggaaaacaaaataaaagagaaaagagtgaaTGGCAGTGACTTTGCTATGGCTGCAGATAGGGCTGGGGCTTCTATGTTTCAAATGAGGAAGAATAAGATATCAACAGATGAATCTGGAGATAGTGTGCAGAGACAAGGAAGAAGTGGAAGGAATTTATCATTAACAAGGCCAGGCCTCCCTTCTGGGAGGGAGAAGTCAGAAAATGCACCACTAATGAAGCCAGTACAGGACATGAAGCCTAATGATAAGAGTAAAACCAAATATGGGCGCCCTCCTTCAAAAAAGCAGAAAGAGCGCAAAATTTTGACTCGTGTAGGAAAGCAACTGAACATTGGTTCTTCTGATTTTGGAGGTGAATCTGATGATGATCGTGAAGAATTATATAAAGCTGCAAATGCTGCTCGTAATGCTAGCAATCTTGCTTGTTCGGGTCCATTTTGGAATAAAATGGACCCTATTTTTGCTTCTATCAGCTTGGATGATGCATCTTACTTGAAGCAACAGCTCAATATTGCTGGGGAATTTGATAAAAGTTTATCTCATATGTTTGGCATTGATCATGATCTGTTGGGTGTTGTTATAAATAACAAGACCACTCAAGGCTCagaggaaagaaagagaagtcaCTGTGATGAAGAATCAACTAAGTTTGATGCTTTAGGTGGAAAGAAGGACATGGAAAGACTGGACAAGGTTACCCCACTATTCCAAAGACTTCTTTGTGCTCTAATTGAAGAAGATGAAAGTGAAGAATCATATCACCAAAGTGATGCAAAGAATATATCTCGACAATGTGCTAGTGATGATTCTCACTGTGGTTCTTgtaatcaaattgattttgaacccAAAGATCGGGATAGAATGGATTCTGAAGTTGAATCAGAGGTGGATCTTCAAATTCAGAAGAATTGCATGTTGGATAGACTATCTTGTAATAAGAGCACCACATCCAACACATTTAGGTACCCAAACACATCCAGTTCTTTACAAAGCACTGGAGTTTGGCAAGGAGACGAAGAATTTTCTCTTTCAGATATCACACACACTGGTGAAATATGTTCAAATGATCTTGATCAACTGCAGCCTGCTGAATTAAGTGTTCCTAGCTTTCCTTCTCCTGATGGCCAGTATCAGCTGATGTCGCTGGATGACAGACTGCTGCTTGAGTTGCAAAGCATTGGCTTATATCCTGAAATATTGCCTGATTTAGCTGAGGAAGATGAAGCTATAAATCAAGACATTGTGAAACTTGAGAAAGCACTGTATGAACAGAAtgggaagaagaagaataactTGGACAAAATTGATAGAGCTATTCAAGAAGGGAGGGACATGGAAAGGCGGAATATTGAGCAAGCTGCATTTGACCATCTTATTGAAATGGCTTACAGAAAGAGATTGGCATGCCGTGGAAGCAAAAACTCAAAAGGGGCAGTTCACAAGGTGTCTAAACAAGTTGCTTTGGCTTTTCTCAAACGTACTCTTGGAAGGTGTAAAAGATATGAAGAAGCTTGCGTTAACTGCTTTAGTGAACCTACCCTACAAAATATCATGTTTGCCCCACCTTCACGTGAGAATGATGGACAACCTGCAGATTGCATGGTCTCTGGGACAGCCAGTAATACATGTAACAAAGCTTCCCATCAAATCGAAGCCAGAAAATCAGTTGCAGTTTCTAGCGCTTCCGAGAAATATGATTGCCATAGAGATTATGCAGATAGGGGATTGGTTGATTCTTTTCAAGGTTCAATTCAGTCATCAGAACAAGCATCATCCAAGAATGGGTCTGTGTTTATCAAGGAAAAGAAGAGGGAAATGCTGGTCAATGGTGATGTCAGTGGTTCATCCTCAAGAGCATCAAATCTCGATGGTGCTGTTCATGGTGGAGTGAAGGGAAAGAGAAGTGAGAGAGATAGGAATCAAAGCCGGGATCAGAGCAGACAAAATTCTATTGGCAGAGCTGGACGCATGTCACTGGACAGTAGCCCAAATGAGAACAAACCAAAAGCTAAGAAGCAAAAGAGTGCTGCTAGTGGACATGATAGGTTTATAGAAGCAAAGGAATCTGCTCGTTTACCAATTCATGGTTCTAGTCTAGCTGTGGCTGATACAATCAATAATGGTAGCAAAGATGGGGCTACATTATCTGGTAATCAAGACACTTCTCAAATAAAGGAATCCACCAACTTTGGGAATTTGCAGCTACATGATCTAAGTTCAATAGAAGAATTTGGTGGGGCGCATGATCTTGGTTCTTGGTTGAACTTTGATGAAGATGGTTTGCAAGACCATGATTCTATTGGCCTTGAAATACCAATGGATGACCTATCAGAGTTAAATATGCTTATGTGA 3717 0.4062 MLSSGNNLNSSSSSGITSSDMPPLPQCLALDSITVGNRKYTGELRRVLGVSAGNTSEDHSFGGPHLKPMAPGASGELKNFKESVQVASRKARDRSKMFGESLSKLEKYEALNIKKRQRTDLSSDRGGGVNLTKMGSQIHKTPNDNLTQRSEARASNSMLNKRIRTSVADVREESRSAAIGRPRMATEKDGNLVQTLGGSSVRNEEKTRRLLARGEGLDQKIKKKRSVGTVGNRVITGERDVKRTALPKANADLKMRLYDAQGFRLKSLPGSGGMKSEGSSELTNTGARMMLTSEQGVSLHRDHVAEQRVVAKGNNRANSQEDPTSSPNTLIKNKVSRAPRTGSVSALESSNVQPSSTTFPGSSIHPMTQWVGQRPPKNSRSRRVKVVSPALCNLEVQVSSEGCLTSDFSVKASSAGNSGFQLASSVDNSTPKYKRPPDDISSPFGLSESEESGAGENKIKEKRVNGSDFAMAADRAGASMFQMRKNKISTDESGDSVQRQGRSGRNLSLTRPGLPSGREKSENAPLMKPVQDMKPNDKSKTKYGRPPSKKQKERKILTRVGKQLNIGSSDFGGESDDDREELYKAANAARNASNLACSGPFWNKMDPIFASISLDDASYLKQQLNIAGEFDKSLSHMFGIDHDLLGVVINNKTTQGSEERKRSHCDEESTKFDALGGKKDMERLDKVTPLFQRLLCALIEEDESEESYHQSDAKNISRQCASDDSHCGSCNQIDFEPKDRDRMDSEVESEVDLQIQKNCMLDRLSCNKSTTSNTFRYPNTSSSLQSTGVWQGDEEFSLSDITHTGEICSNDLDQLQPAELSVPSFPSPDGQYQLMSLDDRLLLELQSIGLYPEILPDLAEEDEAINQDIVKLEKALYEQNGKKKNNLDKIDRAIQEGRDMERRNIEQAAFDHLIEMAYRKRLACRGSKNSKGAVHKVSKQVALAFLKRTLGRCKRYEEACVNCFSEPTLQNIMFAPPSRENDGQPADCMVSGTASNTCNKASHQIEARKSVAVSSASEKYDCHRDYADRGLVDSFQGSIQSSEQASSKNGSVFIKEKKREMLVNGDVSGSSSRASNLDGAVHGGVKGKRSERDRNQSRDQSRQNSIGRAGRMSLDSSPNENKPKAKKQKSAASGHDRFIEAKESARLPIHGSSLAVADTINNGSKDGATLSGNQDTSQIKESTNFGNLQLHDLSSIEEFGGAHDLGSWLNFDEDGLQDHDSIGLEIPMDDLSELNMLM 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 487 555 - -
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 123 161 - -
Ssu3g2352 1238 PANTHER OS05G0107300 PROTEIN 1 1238 - -
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 117 161 - -
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 312 376 - -
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 1084 1099 - -
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 1120 1136 - -
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 487 510 - -
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 310 382 - -
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 1 21 - -
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 426 466 - -
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 533 555 - -
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 1 22 - -
Ssu3g2352 1238 PANTHER SPECTRIN BETA CHAIN, BRAIN 1 1238 - -
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 1100 1119 - -
Ssu3g2352 1238 MobiDBLite consensus disorder prediction 1065 1136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2352 Ssu-Chr3 74416159 74425894 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2352 - - gmx:100817881 2155.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2352 3 74416159 74425894 Ssu3g2352 3 74416159 74425894 ECH