Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2348 ATGGCAGGCACAAACCTTAGTGACGGTTCCAGTAAAAACATTCGATGCCATCACTGCGCAGGACCCCTTTCTAAGGATATGGAAACCAGTAACTGGACCGTTCCCCCCCTTGTCAGGGACAGTTTTTCTATGATTGGTTCTGCCGTTGGTGGCACTACAAGTGCATTTTATGGATTCAACCATGTTATGCCAGTTGTTCGGAGGTGCATAAAAGGACCCATGTGGTTACATTTTCTTGTTGGTACACCGCCTGTCATAGTATTCTCTTCAGCCTGTGCAGGACTGGCAGGTGGGGCTGTTCCTGCCCTTGCACAACTTGTTTCCTCATCTTACAACGCTGCACTATCATCTCCTCCTTCAGAGGATGATAAGATTCAGAAGTCAAGAAATTCCTCCACTCTCTAA 405 0.4716 MAGTNLSDGSSKNIRCHHCAGPLSKDMETSNWTVPPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVRRCIKGPMWLHFLVGTPPVIVFSSACAGLAGGAVPALAQLVSSSYNAALSSPPSEDDKIQKSRNSSTL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2348 134 PANTHER OS01G0264500 PROTEIN 6 133 - -
Ssu3g2348 134 PANTHER OS01G0264500 PROTEIN 6 133 - -
Ssu3g2348 134 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2348 Ssu-Chr3 74370428 74373177 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2348 - - aprc:113859122 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0687 8 11312080 11315027 Ssu3g2348 3 74370428 74373177 PCT