Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2335 ATGGATCCATTCGGTCCGAACCGGCTCCCGAGCCGAAGACTCTCCGCCACGGAGCGCTTCCTCGGCGTTCCATCTCACGCGCCGCCGCACTCCCCGTCCGTCGCCAACGACGATCTCCACGAGGACGACGTCGTTTTCTTCGGCGGCGACTACGGCGCCGAACCGAACCACCACAGCGCCTCCACTCCTTCCTCCTCGACGTCGTCCTCCTCCGCCACTcccaaccaccaccaccaccacggcATCCTCGCCGCGCTTCCCGGGAACGAGACCTCCCGCAGCCTCCGAAACGTGTCGCAGCACTTCCGCAAGGCCTCGATTTCCTCAATCTCGTCCGCGTCCTCCTCCGCGTCCTCGTCGCGCGCGATTCCCTCCCTCCCGCGGCCTCCGCCGCTGGCGCAACCGTCGTCCGTCAAGTTCCACCAGTCGGCGCCGGTGAACGTCCCGATCCTGTCGGCGCGGCGGAGGTGCCGCGAGTTCGACGACGACGAAGAGGAGGAGGACGACGACGAAGAGGAGATGGTGCCTCCGCACGAGATCGTAGCGAGGAATTCGGCGCAGTCGCCGATGCTGGCGTGTTCGGTTCTGGAAGGGATAGGGAGAACGCTGAAAGGGAGGGACCTGCGCCAGGTTCGAAATGCGGTTTGGCGTCAAACAGGTTTCCTCGGTTGA 672 0.6324 MDPFGPNRLPSRRLSATERFLGVPSHAPPHSPSVANDDLHEDDVVFFGGDYGAEPNHHSASTPSSSTSSSSATPNHHHHHGILAALPGNETSRSLRNVSQHFRKASISSISSASSSASSSRAIPSLPRPPPLAQPSSVKFHQSAPVNVPILSARRRCREFDDDEEEEDDDEEEMVPPHEIVARNSAQSPMLACSVLEGIGRTLKGRDLRQVRNAVWRQTGFLG 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2335 223 MobiDBLite consensus disorder prediction 108 123 - -
Ssu3g2335 223 MobiDBLite consensus disorder prediction 108 139 - -
Ssu3g2335 223 MobiDBLite consensus disorder prediction 57 76 - -
Ssu3g2335 223 MobiDBLite consensus disorder prediction 1 80 - -
Ssu3g2335 223 PANTHER - 4 222 - -
Ssu3g2335 223 Pfam Senescence regulator 38 222 IPR007608 -
Ssu3g2335 223 PANTHER EXPRESSED PROTEIN 4 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2335 Ssu-Chr3 74185215 74185886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2335 - - gmx:100779194 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0698 8 11440133 11440774 Ssu3g2335 3 74185215 74185886 PCT