Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2329 ATGAGACCAATTCAGCTTCCGGAGCCGCCAAGCCCTACCGCCCGGAGGGGCACTCCGGACATATTCGAATCCGGAGTTCACACGTTCGTGCGACGCGCCGTCGTAATCGGCAACGGTTTCGCCGCATCGGAGAATCAGAGCATCGGATTGGTTCGCGCCCTTGGCCTCTCCGATAAGCACGTCTTATATCGTGTTACCAGGCCAAAAGGGGGAATTAATGAGTGGCTTCAATGGCTTCCAGTCTCTctccataaaaaaatagattatatagTAAGAATGATTCGCGATTATTCTCAGCTTATGTTGAAATCTCAGGAAAAGAAGCTTATGCCTTTACCTTCAGAAAATGGTGTCAGTGCAGGCTTGTTAGCTGTCTTAGAAGCTGATGTAAAGCAGATAGTTAGTTTTGCTCGTGAAACTTATGAGAAGGAGGGACCTTTGTTGGTTGTCGCATGTGGAAGAGATAGCATTTCTACTGCAAGTTCCATAAAACGTTTAGCATCTGAGAATGTTTTTGTTGTTCAGATACAACATCCAAGATTGCATTTGAATAGGTTTGACATGGTGATTACACCTAAGCATGATTATTATCCTTTGACTTCAGAAGGACAGAAACAGGTTCCTCAGTTTCTTCGAAGTTGGATAACTCCACGTGATCCTCCAGATTGTCATGTGGTTCTCACCATGGGGGCACTACATCAAATAGATTTCACTTCAATACGTAGTACTGCTGTTACTTGGCATGATGAGTTTGCACATGTTCCCAGGCCCTTGCTTGTTGTCAACATTGGAGGACCAACAAGAAACTGTCGATATGGTGTAGACCTTGCCAAGCAGTTAGCTGCTTCTTTGCTCAGTGTTCTTGCTAGTTGTGGGAGTGTTAGGATATCCTTTTCAGAGAGGGCTCCACAGAAGGTGTCCAATATTATATTGAAAGAACTTGGGACTAatccaaaaatttatatttgggaTGGGCAAGGACCTAACCCGCACATGGGCCATTTAGCTTGGGCTGATGCATTTGTTATCACAGCAGATTCCGTTAGCATGATAAGTGAAGCTTGCAGCACTGGGAAGCCTGTTTATGTTCTGGGAGCTGAGCGTTGCAGATGGAAGTTCACTGAATTCCACAAATCATTGAGAGAGCTGGGAGTTGTTCGGCCTTTTACCGGTTCTGAGAATATATCAGAAAGTTGGAGTTATCCACCCCTTACTGATACTGCTGATGCCGCTAAGAAGGTTCATGAAGCACTTGCTGCCCGAGGGTGGAAACTGAAGGTATAG 1284 0.4424 MRPIQLPEPPSPTARRGTPDIFESGVHTFVRRAVVIGNGFAASENQSIGLVRALGLSDKHVLYRVTRPKGGINEWLQWLPVSLHKKIDYIVRMIRDYSQLMLKSQEKKLMPLPSENGVSAGLLAVLEADVKQIVSFARETYEKEGPLLVVACGRDSISTASSIKRLASENVFVVQIQHPRLHLNRFDMVITPKHDYYPLTSEGQKQVPQFLRSWITPRDPPDCHVVLTMGALHQIDFTSIRSTAVTWHDEFAHVPRPLLVVNIGGPTRNCRYGVDLAKQLAASLLSVLASCGSVRISFSERAPQKVSNIILKELGTNPKIYIWDGQGPNPHMGHLAWADAFVITADSVSMISEACSTGKPVYVLGAERCRWKFTEFHKSLRELGVVRPFTGSENISESWSYPPLTDTADAAKKVHEALAARGWKLKV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2329 427 PANTHER MITOCHONDRIAL FISSION PROTEIN ELM1 1 426 - -
Ssu3g2329 427 PANTHER OS02G0535700 PROTEIN 1 426 IPR009367 -
Ssu3g2329 427 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 135 367 - -
Ssu3g2329 427 Pfam Mitochondrial fission ELM1 43 418 IPR009367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2329 Ssu-Chr3 74111971 74116753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2329 - - gmx:100778122 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2329 3 74111971 74116753 Ssu3g2329 3 74111971 74116753 ECH
Ssu8g0702 8 11497313 11500929 Ssu3g2329 3 74111971 74116753 PCT