Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2305 ATGGTTGAGCCATCTTTTGCAGAGAGGTCACTGGTCAATCATAGAGATTACCTTATCAATGGCAATATCGTTACGTCCAATGCCGTCAGTGTTACAGAAACTGAAGTGTGGACTGCAGATGGACATCGAATTGCCTATGACTATCTTGTCATCGCCACTGGCCATGCAGATCGTGTCCCCAAAAGTAGGAGTGAAAGACTTTATCAGTTCGAAGAAGacaatgaaaagataaaatctgCTCGTTCCATTCTGATTGTTGGAGGAGGTCCCACTGGCGTGGAACTTGCTGGGGAGATAGCTGTTGATTTTCCGGATAAGAAGATTACACTAGTGCACAAAGGACCGAGGCTGCTGGATTTCGTAGGGTCAAAAGCTGCGGATAGGACTCTAAAATGGTTGGAATCAAAGAATGTTGTCGTGAAGCTAGAGCAATCAATTGACTTGAACTCCTTCAGAGATGGACAGAAAATATATCATACTTCAAATGGAGAGACCATTGTGGCAGATTGTCACTTCTTATGTTTAGGGAAGCCGCTTGGCTCAGCATGGCTTAATGAAACTGTGTTGAAGAATGACTTGGATTTTCTAGGAAGGATTATGGTAGATGACCAATTGAGAGTCAAGGGTCGGAGCAACATTTTTGCAATTGGAGATATTACAGATGTTCCAGAAATCAAGCAAGGGTTTGCGGCGCAGCAGCACGCGGACGTGGTTGTGAAGAACTTGAAGATGATGATGGGGAGAGGAAGAGACCATAGTCAATGTAGGATGGAAACTTACAAGCCACAGTTAGCAATGGCAATAGTTTCACTTGGGAGGAAAGATGCGGTGGCACAGTTACCATTCTTGACAATCATTGGAAGAGCTCCTGGACTCATAAAGTCTGGAGATTTGTTTGTTGGTAGAACAAGAAAACAAATGGGACTCAATCCTAATATTGTACCAGGCTCCAGCTTGACTCGATATTAA 969 0.4303 MVEPSFAERSLVNHRDYLINGNIVTSNAVSVTETEVWTADGHRIAYDYLVIATGHADRVPKSRSERLYQFEEDNEKIKSARSILIVGGGPTGVELAGEIAVDFPDKKITLVHKGPRLLDFVGSKAADRTLKWLESKNVVVKLEQSIDLNSFRDGQKIYHTSNGETIVADCHFLCLGKPLGSAWLNETVLKNDLDFLGRIMVDDQLRVKGRSNIFAIGDITDVPEIKQGFAAQQHADVVVKNLKMMMGRGRDHSQCRMETYKPQLAMAIVSLGRKDAVAQLPFLTIIGRAPGLIKSGDLFVGRTRKQMGLNPNIVPGSSLTRY 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2305 322 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 1 313 - -
Ssu3g2305 322 SUPERFAMILY FAD/NAD(P)-binding domain 76 243 IPR036188 -
Ssu3g2305 322 PRINTS FAD-dependent pyridine nucleotide reductase signature 46 64 - -
Ssu3g2305 322 PRINTS FAD-dependent pyridine nucleotide reductase signature 198 220 - -
Ssu3g2305 322 PRINTS FAD-dependent pyridine nucleotide reductase signature 82 100 - -
Ssu3g2305 322 Pfam Pyridine nucleotide-disulphide oxidoreductase 30 234 IPR023753 GO:0016491
Ssu3g2305 322 PANTHER APOPTOSIS-INDUCING FACTOR 1 1 313 - -
Ssu3g2305 322 Gene3D - 5 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2305 Ssu-Chr3 73635498 73637886 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2305 K22745 - gmx:100785294 515.383