Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2304 ATGGAAAAAGGCAGGAAGAGGGTGGTGATCCTAGGAGGTGGCGTTGCGGGTTCCCTCGTGGCTAAATCTCTCCAATTTCAAGCCCATGTCACCCTCGTTGATCCGAAGGAATATTTTGAGATTCCATGGGCAAGTTTGAGGTCAATGGTTGAGCCATCTTTTGCAGAGAGGTCGGTTTTCAATCATAGAGAGTACCTTACCAATGGCGATATCGTTATGTCCAATGCTGTCAATGTTACAGAAACTGAAGTGTTGACTGCAGATGGACATCGAACTACCTATGACTATCTTGTTATTGCCACTGGCCATGCAGATCGTGTCCCCAAAAGTAGGAGTGAAAGACTTAATCAGTTCAAAGAAGacaatcaaaagataaaatctgCTCATTCCATTCTGATTGTTGGAGGAGGCCCCACTGGCGTGGAACTTGCTGGAGAGATAGCTGTTGATTTTCCAGATAAGAAGATTACACTAGTGCACAAAGGATCAAGGCTGCTAGAATTCATAGGGGCAAAAGCTGCAGATAAGACTCTAACTTGGTTGAAATCAAAGAATGTTGTGGTGAAACTAGAGCAATCAGTTGACTTGAGCACATTCACTGATGGACAAAAGATGTATCAAACTTCAAATGAAGAGACGATTGAGGCAGATTGTCATTTCTTATGCATAGGGAAACCGCTTGGTTCAGCATGGCTTAAGGAAACCATGTTGAAGAATGACTTGGATGTCCAAGGTAGGGTTAAGGTAGATGAAAAATTGAGAGTCAAAGGTCGGAGCAACATTTTTGCAATTGGAGATATTACAGATATTCCAGAAATCAAGCAAGGGTTTTTGGCTCATCAGCAGGCTGAAGTGGTTGTGAAGAACTTGAAGTTGATGATAAAGGGAGGAAGAGAATATTGGACGGAAACTTACAAGCCACATTCAGCAGTGGCAATAGTCTCACTAGGGAGGAAAGATGCGGTGGCACAGTTACCATTCTTGACAATCATCGGAAGAATACCTGGATTCTTGAAGTCTGGAGATTTGTTTGTTGgtaaaacaagaaaacaaatggGACTTAATCCTGATATTGTACAAGCTTGA 1086 0.4125 MEKGRKRVVILGGGVAGSLVAKSLQFQAHVTLVDPKEYFEIPWASLRSMVEPSFAERSVFNHREYLTNGDIVMSNAVNVTETEVLTADGHRTTYDYLVIATGHADRVPKSRSERLNQFKEDNQKIKSAHSILIVGGGPTGVELAGEIAVDFPDKKITLVHKGSRLLEFIGAKAADKTLTWLKSKNVVVKLEQSVDLSTFTDGQKMYQTSNEETIEADCHFLCIGKPLGSAWLKETMLKNDLDVQGRVKVDEKLRVKGRSNIFAIGDITDIPEIKQGFLAHQQAEVVVKNLKLMIKGGREYWTETYKPHSAVAIVSLGRKDAVAQLPFLTIIGRIPGFLKSGDLFVGKTRKQMGLNPDIVQA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2304 361 Gene3D - 4 348 - -
Ssu3g2304 361 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 5 358 - -
Ssu3g2304 361 Pfam Pyridine nucleotide-disulphide oxidoreductase 6 280 IPR023753 GO:0016491
Ssu3g2304 361 PANTHER APOPTOSIS-INDUCING FACTOR 1 5 358 - -
Ssu3g2304 361 SUPERFAMILY FAD/NAD(P)-binding domain 126 224 IPR036188 -
Ssu3g2304 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 8 27 - -
Ssu3g2304 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 130 148 - -
Ssu3g2304 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 246 268 - -
Ssu3g2304 361 PRINTS FAD-dependent pyridine nucleotide reductase signature 94 112 - -
Ssu3g2304 361 SUPERFAMILY FAD/NAD(P)-binding domain 7 291 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2304 Ssu-Chr3 73624759 73627969 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2304 K22745 - gmx:100813439 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2304 3 73624759 73627969 Ssu3g2304 3 73624759 73627969 ECH