Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2303 ATGGTGGAGAAGAAAGTGGTCATCGTAGGAGGTGGTGTTGCCGGTGCCGTCCTCGCAAAAACTATACAACATCAAGCCAACGTTACCCTTATTGATCCGAAGGAATATTTTGAGATTCCATGGGCAAGTTTGAGGGGGTTGGTTGAGCCACCTTTTGCTGAAAGGATAGTGATCAACCACAGAGAGTACTTCAAAAAAGGTGACCTTGTTGTATCCAGTGCTGTCAACATAACTGAAACTGAAGTGTTGACTGCAGATGGCCAGCAGATTGCCTATGACTATCTTGTTATTGCCACTGGCCACACAGAACCTATCCCCAAAACCAGGAGTGAAAGACTTGACCAATACAAAGGAGGTCCAACTGGTGTTGAGCTTGCGGCAGAGATTGCTGTTGATTTTCCTGCTAAGAAGGTCACTATAGTGCATAAGGGAACAAGGTTGCTGGAATACATTGGGCCAAAAGCTTCAAGGAAGACTTTGAAGTGGCTCAAATCAAAGAAAGTTGATGTGAAACTAGAGCAATCAGTTGAGTTGAGCTCCTCTGCGGAAGAAAGTAAGACATATCAAACTTCAAGTGGAGAGACTATAAAAGCAGATGCTCATTTTCTATGCATAGGGAAACCACTTGGTTCAGCATGGCTTAGAGAAACTCTTTTAAAGGATGACTTGGATGCTGATGGAAGGATCAAGGTCGATGAACACTTGAGAGTGAAGGGCCGGAGCAACATTTTTGCAATTGGAGATATTATAGATGTTAAAGAAATCAAACAAGGGGTGTATGCACAAGGTCATGCTCAATTGGTTGCCAAGAACCTGAAGCTATTGATAGAGGGAGGAGGCAAAGAGCGTAAGTTGGGCACATACAAGGCACAGCCACCAATATCTATTGTTTCACTTGGAAGGAAACATGGGGTTGCACAGTTCCCATTCATGACAGTCCTTGGAAGGTTTCCTGGCATGATCAAGTCAGGAGATTTGTTTGTGGGAAAAACCAGAAAGGATTTAGGACTCGAAGCTAAtgttaaaaaatcttaa 1035 0.4319 MVEKKVVIVGGGVAGAVLAKTIQHQANVTLIDPKEYFEIPWASLRGLVEPPFAERIVINHREYFKKGDLVVSSAVNITETEVLTADGQQIAYDYLVIATGHTEPIPKTRSERLDQYKGGPTGVELAAEIAVDFPAKKVTIVHKGTRLLEYIGPKASRKTLKWLKSKKVDVKLEQSVELSSSAEESKTYQTSSGETIKADAHFLCIGKPLGSAWLRETLLKDDLDADGRIKVDEHLRVKGRSNIFAIGDIIDVKEIKQGVYAQGHAQLVAKNLKLLIEGGGKERKLGTYKAQPPISIVSLGRKHGVAQFPFMTVLGRFPGMIKSGDLFVGKTRKDLGLEANVKKS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2303 344 SUPERFAMILY FAD/NAD(P)-binding domain 4 274 IPR036188 -
Ssu3g2303 344 Gene3D - 118 331 - -
Ssu3g2303 344 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 1 344 - -
Ssu3g2303 344 SUPERFAMILY FAD/NAD(P)-binding domain 118 203 IPR036188 -
Ssu3g2303 344 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 106 IPR023753 GO:0016491
Ssu3g2303 344 Gene3D - 2 117 - -
Ssu3g2303 344 Pfam Pyridine nucleotide-disulphide oxidoreductase 118 264 IPR023753 GO:0016491
Ssu3g2303 344 PANTHER APOPTOSIS-INDUCING FACTOR 1 1 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2303 Ssu-Chr3 73618767 73621339 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2303 K22745 - gmx:100817682 589.726