Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2297 atggagaaagagaaagagaaagtagTAGAAAACTGGAGTGAAGCGGTGGAAGACCTGGTAGACACCGGCGACGTGGAATCGGCGATCTCACTCCTCGAATCCGTCGTCGAGACCCTAAACCCTTCCGATTCGGCTTCGCAGCCTCCGTTGGCCTCTGCTCTCTCCGACTTGGCCAACCTTTACTCCTCCAAAGGCTTCTCTCTCAAAGCCGACCACCTTCTATCTCGCGCTTCCCTCCTCAGACAACTTCACCATTCCCcTGGCGAACAACTTCCAAAAGAGTCCAAGGAGGACGGAGTTGTTAAACCAACCAGCGTTGCTTCGCGTCGTTCTGAAGGAAGCGTTGAAAAGCGTGCGGAGTTGCCTGCTCGGACCTCCGCCGTCGACGGTTCTTCCGATGAAGATTGGGAAGCAATGGCAGATCGTGAACCTGATGAGTTACTGCCCACGGTATCGTCAGATTGTGTATCtggaatatcaaatattaaattggaGAGTGCCAAAAGTGGAACCCCAAAAAGGCGGGGAAGAGGAACATTCTCTTATGAGAAACGAGAACTTTATAGTGATCAGTTACTTGATAGCTCGGTCGGTGATGTCGAGCATGAAGCAACTCACTGTAGTTCAGAAGATAATGGAGATGTACGAAGCTCAAAATATGGGACCAGTCATGTTCTTGTTCTGGCTGACTTTTCACCAAGTACTAGGACAACAGAGCTGGAGAAGCTGTTCGAGGACTTCAAAGATCGTGGATTTGTAATTCGTTGGGTCAATGATACAGTTGCACTTGCAGTATTCCGAACACCTGCAGTTGCACTTGAGGCTCTAAATAGTGTTCGCTGTTCATTCACCACGAGGAtacttgatgaagatgatgCACTTCTTAGTTCAATTAAAGCAAGAGACCTGGAACCACCGCGGCAACGGCCGAAAACTTCAGCCCAAGCAGCGCAGAGGCTGATTGCTCATGGCATGGGGTTAAAATTGTCATCTACAAGCGTTGGGTCCCGAGAATATAGAAAGCAAGAAGATGCTAGGAGGGAACGTATCGTTACcaggcaaaaattgagagacGAGGCTTGGGGAGACGATTAA 1095 0.4603 MEKEKEKVVENWSEAVEDLVDTGDVESAISLLESVVETLNPSDSASQPPLASALSDLANLYSSKGFSLKADHLLSRASLLRQLHHSPGEQLPKESKEDGVVKPTSVASRRSEGSVEKRAELPARTSAVDGSSDEDWEAMADREPDELLPTVSSDCVSGISNIKLESAKSGTPKRRGRGTFSYEKRELYSDQLLDSSVGDVEHEATHCSSEDNGDVRSSKYGTSHVLVLADFSPSTRTTELEKLFEDFKDRGFVIRWVNDTVALAVFRTPAVALEALNSVRCSFTTRILDEDDALLSSIKARDLEPPRQRPKTSAQAAQRLIAHGMGLKLSSTSVGSREYRKQEDARRERIVTRQKLRDEAWGDD 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2297 364 PANTHER GROWTH INHIBITION AND DIFFERENTIATION RELATED PROTEIN 88 1 363 IPR039884 -
Ssu3g2297 364 SUPERFAMILY RNA-binding domain, RBD 217 278 IPR035979 GO:0003676
Ssu3g2297 364 Gene3D - 221 289 IPR012677 -
Ssu3g2297 364 MobiDBLite consensus disorder prediction 84 135 - -
Ssu3g2297 364 PANTHER OS01G0965600 PROTEIN 1 363 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2297 - - gmx:100817151 593.964