Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2267 ATGCTCGATGTGAAGATTTATGGCCAGTGGTTTACAAAAGGGACGAGGTTTTTGGCAATTGGGGCAAACCCAACAAGCCAGTTGTCCGTGATTGGGAACTTGGTGGGTGCACAGGCTGCTGCACAAACGGGTTGGAAGGAGAGTGCACTATGCATGTTTTCTTTGGGTATTACACATTACTTGATGCTTTTTGTGACTCTGTATCAGAGGTTGGCAGGGGACAATAGCCTCCCTTCAATGCTACGTGCAGTGTTCTTCTTGTTCTTTGCAGCACCAAGCATGGCAAGCTTGGCTTGGGACTCCATCTGTGGCAAGTTTGACACCACGTGCAAGATGCTTTTCTTCCTCTCCCTCTTCCTTTTCATGTCCCtgGTTTCGAGGCCTCTGCTATTTAAGAGGTCGATGAAGAAGTTCAATGTGGCATGGTGGGCTTATTCTTTTCCTCTGACGGCATTGGCACTGGCTTCGGCAGATTTTGGTGTCTCTGATCTTAATGGTTATCACTGCTCCAACATTAGCAAGCACGCCCTTGCCCGCTCGCAACCTTAA 549 0.4827 MLDVKIYGQWFTKGTRFLAIGANPTSQLSVIGNLVGAQAAAQTGWKESALCMFSLGITHYLMLFVTLYQRLAGDNSLPSMLRAVFFLFFAAPSMASLAWDSICGKFDTTCKMLFFLSLFLFMSLVSRPLLFKRSMKKFNVAWWAYSFPLTALALASADFGVSDLNGYHCSNISKHALARSQP 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2267 182 Pfam Voltage-dependent anion channel 6 160 IPR004695 GO:0016021|GO:0055085
Ssu3g2267 182 Gene3D - 1 175 IPR038665 -
Ssu3g2267 182 PANTHER OS11G0274300 PROTEIN 1 159 - -
Ssu3g2267 182 PANTHER - 1 159 IPR030183 GO:0006873|GO:0008308|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2267 Ssu-Chr3 72752817 72753781 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2267 - - gmx:100794114 293.123