Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2265 ATGGCACCATCATTTTCGTCACCAACCAAATTCTCGTCCTTCTCATTGCTTTTGATATCGATAACAATGCTTTATCAAGCTAATGGTCAAGCACCGCTTCAAACAACCTTGGTGTTCTACCTCCAAGACATAGCAAGAGGGCCCAATGCAACAGTGGCCCCAGTCACTGGCATCAACGGAAGGGATTGGACCTACGACCAATTCGGAACCATATTTGCAATTGACGACCCGGTCATGTTGAGCCCAAGCCCGCTCTCTGCTCCAGTGGGCCGCGCCCAAGGCTTGCTCGTAGTGTCGGCCCATGACGGTGCCAACGTGAACGCGGTGCTGTCGATTGTGTTCACCAATTTGCAGTACAGCGGGAGCACCCTGGAGATCCAAGGCGTTAGTCGTCAGCGTGAGGATTATAAAGAGCTCTCGGTGGTGTCTGGGACTGGCAGGTTTCGCTTTGCGAGGGGCTATGCTGCGTTCGAGACTGCGTTCTATGATGCGGAAACGGCACACTCTATCATTCGCTTGACTATAATTTTGAGACAAtcttga 543 0.512 MAPSFSSPTKFSSFSLLLISITMLYQANGQAPLQTTLVFYLQDIARGPNATVAPVTGINGRDWTYDQFGTIFAIDDPVMLSPSPLSAPVGRAQGLLVVSAHDGANVNAVLSIVFTNLQYSGSTLEIQGVSRQREDYKELSVVSGTGRFRFARGYAAFETAFYDAETAHSIIRLTIILRQS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2265 180 Gene3D - 22 175 IPR044859 -
Ssu3g2265 180 PANTHER DIRIGENT PROTEIN 1 178 - -
Ssu3g2265 180 Pfam Dirigent-like protein 35 176 IPR004265 -
Ssu3g2265 180 PANTHER NUCLEOPORIN-RELATED 1 178 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2265 Ssu-Chr3 72743837 72744379 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2265 - - gmx:102661321 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2265 3 72743837 72744379 Ssu3g2265 3 72743837 72744379 ECH