Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2244 ATGGGTGTTGTGTTGAAGCTAGTAGACGccattttgttgttgttcttccTCTTTGTGACGGTGGTGGCTCCTTTGATCGATGCTCAAATGTGTCTTCCTGTCAGTTACTTCCCTGACATCCTTGTCCAACTCAAGGCACGGTACACCCACAAATACGATGATTACCTCGCGGCTGAAAAGCCACGCTTTTTCGTAGGCCTTGTTTGGCTTGAGCTTCTCTTCCAATGGCCACTTGCACTTCTAAACCTCTATGCCATTCTCACTTCCAAGCCTTGGTTCAACACCACTTGCTTGATCTATGGGGTCTCTGTCTCTACTTCCATGttaatggAGTCACATGTTTATGTGGTTCATATGGTAACATGA 366 0.4317 MGVVLKLVDAILLLFFLFVTVVAPLIDAQMCLPVSYFPDILVQLKARYTHKYDDYLAAEKPRFFVGLVWLELLFQWPLALLNLYAILTSKPWFNTTCLIYGVSVSTSMLMESHVYVVHMVT 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2244 121 Pfam EXPERA (EXPanded EBP superfamily) 41 109 - -
Ssu3g2244 121 ProSiteProfiles EXPERA domain profile. 8 121 IPR033118 -
Ssu3g2244 121 PANTHER SIGMA INTRACELLULAR RECEPTOR 2 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2244 Ssu-Chr3 72345250 72345702 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2244 - - gmx:100790628 183.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2244 3 72345250 72345702 Ssu3g2244 3 72345250 72345702 ECH