Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu3g2235 | ATGTGTAAGGCCAtgaaggtggtggtggagaaTTTGACAGGAACACTTTTCTACATTCAAGTGGGCAATGATGCCACAGTCGAAGAtctaaagaaagaaattgagGCTCAACAAAAGCTTCCTTGTGACCGTTTGATCCTCGTTCTTGATGCTGATCATTGCCTTCTAATGAGCAAAGAGGAAGAAAATGCTTCTCTAATTGATTGTGGAATCCAAGAGGGGTctcatatttatcttttcttcaatccaattaatgatgattataatgataatttcttGTTTACTTGGCCAGATTTTTATCTTGGTTAG | 309 | 0.2913 | MCKAMKVVVENLTGTLFYIQVGNDATVEDLKKEIEAQQKLPCDRLILVLDADHCLLMSKEEENASLIDCGIQEGSHIYLFFNPINDDYNDNFLFTWPDFYLG | 102 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu3g2235 | 102 | SUPERFAMILY | Ubiquitin-like | 3 | 84 | IPR029071 | - | |
| Ssu3g2235 | 102 | Gene3D | - | 3 | 81 | - | - | |
| Ssu3g2235 | 102 | Pfam | Ubiquitin family | 8 | 82 | IPR000626 | GO:0005515 | |
| Ssu3g2235 | 102 | ProSiteProfiles | Ubiquitin domain profile. | 5 | 79 | IPR000626 | GO:0005515 | |
| Ssu3g2235 | 102 | CDD | Ubl_ubiquitin_like | 7 | 80 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu3g2235 | - | - | lja:Lj3g3v2900800.1 | 160.614 |