Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2233 ATGACTCACCTGGTCACTCGCACTCAACTCGCCCGAGTCACGCCGTTCATTCATCGCCCCAAACCTTCTTTCCTGACACCAACAACAatttcttgttcccaaaccctCTCTCTCCCCCAATTCTCTACCAAAACCGCCGCCGCCGCCCGCCGCCGAACGCGCCCTCTCCTCCGGCCGGCGATGGACGCGCAACCGCCAGAATCCGCCGCGGCGGAGGACTTCGTCCACGTCGTGGATCTGAAGATGGAGAGCCTGTCCGAGAGCATGGTTAGAATCGACGAGCCTTCCGACGCCGACGCCGCTCCCTCCGCGCCCGAAGCCGCGGCGAATTCCGATCGCCTTCCTGCGACGCTCCCGGAGGAGCTCTCGAGAAACGTGCTGGTCCTGTCGTGTGAGTCCGCCGCCGAAGGCGGCGTCTGCGACGTTTACTTGGTCGGCACCGCTCATGTCTCCGAGGAATCAAGCAGGGAAGTTCAAGCTATAGTGAATTTTCTGAAACCGCAGGTTGTCTTCCTAGAATTGTGCTCAAGTCGGGTGGCTGTGCTTACTCTTCAAAATCTCAAGGTACCCACTATGGGAGAAATGATTACAATGTTGAAGAAAAAACATAACATGTTTGAAGTACTTTATGGCTGGTTCCTTGCCAAGATTGCCAGTAAGCTTGAGGTCTTTCCTGGATCTGAATTTCGTGTGGCATATGAAGAAGCCATCAAGTATGGTGGCAGAGTGATACTTGGTGATCGCCCTGTACAGATTACGTTAAGGAGAACATGGAATAAGATGCCACTTTGGCATAAGACAAAAttgttatattctttatttttccaaGCAGTTTTTTTACCCAGCTCTGATGATCTTAATAAGATGCTGAAGGAAATGGATGACAGTGACATGCTAACTCTTGTTATTCAGGAAATGAGTAAGGAATTTCCAACTTTAATGGAGACTCTTGTGCATGAACGAGATCAGTACATGTCCTCCACATTGTTAAAAGTCGCAAGTGAGAATAGTTcggttgttgctgttgttggaAAGGGCCATCTACAGGGAATAAAGAGGCATTGGAAGCAACCTGTCGTGATGAAGGATCTCATGACAGTTCCATCTCCCAAACCTGCTATCTCTGCAATAAGAATCTTTACTTCTGTCGGTGTTGCCGTGGCTGGGGTGGCCATTATATCAGGCATCTATCTTTCATGCAAGAAATGA 1209 0.4781 MTHLVTRTQLARVTPFIHRPKPSFLTPTTISCSQTLSLPQFSTKTAAAARRRTRPLLRPAMDAQPPESAAAEDFVHVVDLKMESLSESMVRIDEPSDADAAPSAPEAAANSDRLPATLPEELSRNVLVLSCESAAEGGVCDVYLVGTAHVSEESSREVQAIVNFLKPQVVFLELCSSRVAVLTLQNLKVPTMGEMITMLKKKHNMFEVLYGWFLAKIASKLEVFPGSEFRVAYEEAIKYGGRVILGDRPVQITLRRTWNKMPLWHKTKLLYSLFFQAVFLPSSDDLNKMLKEMDDSDMLTLVIQEMSKEFPTLMETLVHERDQYMSSTLLKVASENSSVVAVVGKGHLQGIKRHWKQPVVMKDLMTVPSPKPAISAIRIFTSVGVAVAGVAIISGIYLSCKK 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2233 402 PANTHER PHEROMONE SHUTDOWN PROTEIN 55 402 IPR046345 -
Ssu3g2233 402 MobiDBLite consensus disorder prediction 93 115 - -
Ssu3g2233 402 PANTHER TRAB FAMILY PROTEIN 55 402 - -
Ssu3g2233 402 CDD TraB_PrgY-like 142 355 IPR046345 -
Ssu3g2233 402 Pfam TraB/PrgY/gumN family 138 357 IPR002816 -
Ssu3g2233 402 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2233 Ssu-Chr3 72082404 72086920 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2233 - - gmx:100810061 676.781