Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2232 ATGCGTGGGTTTTACTATATCTGTCATAATATGAGGGTGCTAATTTCTATCCGCGTTTTTGCTGTTACGTGGGAGGCACTATTACTATTCATTATTATGTTTCTCTTGTTATTCCTGTTAATGGTAAGCTtggtttcattattattttatgcattCTGTTTGTATCTTCTGGAATGTTTGTTGTTTTCGATATTAGTCTGCAATAATGgagctttgttttttatttcaggGAGGAGAGACTATTTAGGTAATGATTTGAGGGATAAACTTGACAGAAGGCATTTATCTCCTCAAAGGTACTCACCAGCTCAAGATGCAAGAGGCCGCCAGACCATCCGTGAATACAGTCCTTCGAGGTCTTTGGAGAAAAGAAGTGACAGAAGACATAAGAGAAAACAGGGTGTTACTGGCCAAAGTGATGTTTCTGGAAATTTGAAAGTATCAGATAGAATTCAAGATCGAGTTAAAGAAGGAAAATTACTTTCCTCTGGTTCTAGGAATACTCTTGAGGAGCAGCTGAAGAAAGTAGATTCAGATATCAAAGCTCTTAAGGACCGAAAATTCCAGCTAGGGGTCTACCTTGATGAGAGTGTTCAAGAAGTGGATAGCCTTAATTCCAGAATTCAAGAACTTGAAGCTCAATTATGCAAAGAGGATGAGGAGTGCAAAAGAATTACTTCAAGAATAAGGAAATTTGTTAGAGTGCACAATCACATGTCACAGTTACAAGACGAACTGAAGAGATCACAAGTCCGAGTTCAAAGGTTTGGAGATCAGCTTGTCTCAGACATTTCTAGAATTGGTGCCAATGAAGAGgatttaagtattgatattgTAAGCAATTGTGAAAATACTGGTCTTCCTCCAATCGTCAAACATAATGTGGAGCACAATGATGCATCATCCCACAGAAAAAGGCTGCATATTGAACAAGATGCTTTGGAAGAGTTAAAACAAGATAGATCAAAAGATGGGCATTTGGTTGAGACAGCTAGAACTAGGAAGCGTTCTCGCTGGAATTTATCAGATCAATTGAATGACGAGTCCCTTGGGACCCCAGACAATGGAACTGAAGTTACTAGAGCTCTAGATATTGAAGGCAAGCACAAGAGAGGATTGAAGCAACCCAGGATTGAAGTGCCATCAACCAGCATGGCAGCTCATGTGGTTGATGAGGACGTTGAGATTGAACTTTATGACGGAACTGATATCAATGAAACTGCAAATACAGAAAATGAGAATGGAGTGGCATATAAGGTGAAGGGTGCACCACTTATGCTTCCCCCAGCTTTGATTCCTCGTGGCAATTATTCACAGTATGAGGGTAACGACGAGAATGTTGATGtggatggttga 1356 0.3813 MRGFYYICHNMRVLISIRVFAVTWEALLLFIIMFLLLFLLMVSLVSLLFYAFCLYLLECLLFSILVCNNGALFFISGRRDYLGNDLRDKLDRRHLSPQRYSPAQDARGRQTIREYSPSRSLEKRSDRRHKRKQGVTGQSDVSGNLKVSDRIQDRVKEGKLLSSGSRNTLEEQLKKVDSDIKALKDRKFQLGVYLDESVQEVDSLNSRIQELEAQLCKEDEECKRITSRIRKFVRVHNHMSQLQDELKRSQVRVQRFGDQLVSDISRIGANEEDLSIDIVSNCENTGLPPIVKHNVEHNDASSHRKRLHIEQDALEELKQDRSKDGHLVETARTRKRSRWNLSDQLNDESLGTPDNGTEVTRALDIEGKHKRGLKQPRIEVPSTSMAAHVVDEDVEIELYDGTDINETANTENENGVAYKVKGAPLMLPPALIPRGNYSQYEGNDENVDVDG 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2232 451 Coils Coil 239 259 - -
Ssu3g2232 451 MobiDBLite consensus disorder prediction 97 143 - -
Ssu3g2232 451 Coils Coil 194 214 - -
Ssu3g2232 451 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 73 450 IPR045868 GO:0046872
Ssu3g2232 451 Coils Coil 166 186 - -
Ssu3g2232 451 Coils Coil 300 320 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2232 - - gmx:100811131 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2232 3 72072679 72079023 Ssu3g2232 3 72072679 72079023 ECH