Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2217 ATGGCCAGAGTAGCAGGCATTTTTCTGTGTCTCCTGATTTTAATCATGGATGTTGCAGCTGGGATTCTTGGCTTCGAGGCTGAAATAGCACAAAACAAGGTTAAGCACTTAAGACTCTGGATATTTGAGTGTAGAGAGCCAAGTCATCAAGCCTTCATGTTGGGGTTGGGTGCTGCAGTGCTTTTGGGACTAGCCCATGCTATAGCCAATTTGCTAGGTGGCTGCAACTGCATTTGTTCTCAACAAGAGTTTGAGAAGGCTTCCTCCAATAGGCAACTCTCAACGGTTTGCCTTATTTTAACTTGGGTTGTGTTGGCCATTGGATTGTCCATGCTGGTTATAGGGACTATGTCAAACAATAAATCAGATGGTTCCTGTGGCTTCTCACATCATCACTTCCTGTCCATTGGTGGGATTTGTTGTTTTGTTCATGGCCTATTCTGTATTGCATATTACGTTTCTGCCACTGCCTCCATGGATTAA 483 0.441 MARVAGIFLCLLILIMDVAAGILGFEAEIAQNKVKHLRLWIFECREPSHQAFMLGLGAAVLLGLAHAIANLLGGCNCICSQQEFEKASSNRQLSTVCLILTWVVLAIGLSMLVIGTMSNNKSDGSCGFSHHHFLSIGGICCFVHGLFCIAYYVSATASMD 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2217 160 PANTHER OS07G0462200 PROTEIN-RELATED 2 160 - -
Ssu3g2217 160 Pfam Protein of unknown function (DUF1218) 58 145 IPR009606 -
Ssu3g2217 160 PANTHER PROTEIN, PUTATIVE-RELATED 2 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2217 Ssu-Chr3 71743311 71744199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2217 - - gmx:100787042 314.309