Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2210 atgaacAAGCTTGGTTTGGTTGTTCTGCTACTAATTGCTCAGATCTTAGTACCTCATGTCATTGCCCATGAGTCTGAGGCACAGGCACCACTCCCAGTGCTGAACCCTTTTGAGAATAAAACTCAAACAGGAGTTCAGCTTCACGATCAGACGACTGATAACAAAGTTGCTGACCGTCCAGTTTCTGGTGAGTCATCATCAGAAGAGGAAAGTGGAGAATCTAAAGCTGCTGAGGCACCACAAATTCGAAGGCTGGGAAAGCATCATTCCACGGACAAGTCAGTGGCAGGTGGGGGGGTCATCATTGGAGGGCTTGTTACTGCCATCTTTGCTGCTGTGTTTTGCTACATTCGGGTTACTAGGAAAAGGGACACTCGTTACTGA 384 0.4688 MNKLGLVVLLLIAQILVPHVIAHESEAQAPLPVLNPFENKTQTGVQLHDQTTDNKVADRPVSGESSSEEESGESKAAEAPQIRRLGKHHSTDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDTRY 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2210 127 MobiDBLite consensus disorder prediction 62 91 - -
Ssu3g2210 127 MobiDBLite consensus disorder prediction 40 96 - -
Ssu3g2210 127 PANTHER EXPRESSED PROTEIN 1 126 - -
Ssu3g2210 127 MobiDBLite consensus disorder prediction 40 61 - -
Ssu3g2210 127 PANTHER EXPRESSED PROTEIN 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2210 Ssu-Chr3 71678833 71679216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2210 - - lja:Lj0g3v0359529.1 114.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0832 8 13949269 13949649 Ssu3g2210 3 71678833 71679216 PCT