Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2201 ATGGAGAAAGGTTTAATCTCCGTTGACCGTTGGGCAGAAGGAAGCCAGGCCTATTTCCTCACCCACCTCCACTCCGACCACACCCACGGCCTCTCCTGCGCGTGGTCCCACGCGCCCCTCTTCTGCTCCCCCCTCACCGCCAAACTCCTCCCCTTCAGGTTCCCCCGCTTCGACCTCTCCCTCCTCCGCATCCTCCACCCCGGCACCACCCACACCCTCACCCTCCCCTCCACCCTCCTCCACGTCACCGCCATCGACGCCTGTCACTGCCCCGGTTCCATTATGTTGCTGTTCCGCCGCGAGTTCGGGTGCGTGCTCTACACGGGGGACTTCAGGTGGGAAGCCACGTGCGAGAAAGCCAACAGGGCCCGGCACGTGCTTCGAGACGCTCTCCAGAACGTTCCTGCCGTCGATGTTGTTTACCTCGACAATACCTACTCCAATCCTATCTATGATTTTCCGCCGCGCCATGTGGCTGCTCAGAAGGTTATCGATATCATTTCGTCGCATCCCGATCATGACGTCATTATTGGGATTAACACTCTGGGGAAGGAAGATCTGTTGGTTGAAATTTCGCGCGCGCTTCAAATCAAGatTTGGGTGTGGCCAGAGCGGTTGCGGACTATGCATCTTCTTGGTTTCCGTGATATTTTTACAACGAACACGTCTCTTACTAGAGTGAGAGCTGTTCCTCAATATAGCTTTAGCGTTGAAACTTTGGAGGCACTAAATGCAACGCAGCCAACTATAGGAATCATGCCATCGGGTCTTCCATGGATAAAGAAATCCCTTCAAAAGAATGAGTTTCTTTCTGGTTCTTTTTTGACATCTCGTTATAAGAGAGGCAAATGGAGTGAAAATAGTGAGGTCCAGATTGATAAGCAAATTGGAAACATAGGATCACCCGAGAAATTTCACAAGTACATGTACTCAGTTCCCTACTCTGATCACTCAAATTTTGAGGAGATTGAGGATTTTATAAAGCTTGTCCAACCAACCAGCCTCAAGGGCATTGTGTCTTCCTCGTCATGCTATATTGAACCCATGTACTATTTTGGTCGACTTTGTCGTGTTAACCAACAAGCACAGCAGTTGCATGAGGGGtacaaaaggaaagaaagtggTAAAGGAGTAGGAGCAGTCAGATCCAAAACTTCATTTGGAGGTGATAATGTTGACACAGTTAGAGACAGAGGGAAGGCTTTGAAGGGTAAGTTTCCTGGTGTTCGTCTGAGCAGGTTTAGTATATTGAGAAGAAAGCAACGTGGTGCAAAAATTCAGGAAGATAACAGTCCCGATCAAGGATGA 1308 0.4901 MEKGLISVDRWAEGSQAYFLTHLHSDHTHGLSCAWSHAPLFCSPLTAKLLPFRFPRFDLSLLRILHPGTTHTLTLPSTLLHVTAIDACHCPGSIMLLFRREFGCVLYTGDFRWEATCEKANRARHVLRDALQNVPAVDVVYLDNTYSNPIYDFPPRHVAAQKVIDIISSHPDHDVIIGINTLGKEDLLVEISRALQIKIWVWPERLRTMHLLGFRDIFTTNTSLTRVRAVPQYSFSVETLEALNATQPTIGIMPSGLPWIKKSLQKNEFLSGSFLTSRYKRGKWSENSEVQIDKQIGNIGSPEKFHKYMYSVPYSDHSNFEEIEDFIKLVQPTSLKGIVSSSSCYIEPMYYFGRLCRVNQQAQQLHEGYKRKESGKGVGAVRSKTSFGGDNVDTVRDRGKALKGKFPGVRLSRFSILRRKQRGAKIQEDNSPDQG 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2201 435 Gene3D - 152 317 - -
Ssu3g2201 435 Gene3D - 5 336 IPR036866 -
Ssu3g2201 435 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 5 375 - -
Ssu3g2201 435 Pfam DNA repair metallo-beta-lactamase 217 334 IPR011084 -
Ssu3g2201 435 SUPERFAMILY Metallo-hydrolase/oxidoreductase 16 333 IPR036866 -
Ssu3g2201 435 PANTHER PROTEIN ARTEMIS 5 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2201 Ssu-Chr3 71542957 71545467 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2201 K15341 - gmx:100775842 705.671