Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2186 ATGGCTTCTAACTTCCTGAACAACTTCAAAATTCCCGACTACATTCTCGTACCGGGCTCCGACGTTGAAACTGTTGGTCACGTGCCTCAGTGTCCGGTGTTGGTTTTCGTCAACTCCAAGAGTGGCGGCCAGCTCGGAGGGGATCTCTTGAAAACCTACCGCACTCTTCTTAATCCCAAACAGGTTGTTGATTTGGGGGAGCATGCTCCTGATAAGATTCTTAGAGAAGTCTATGCTAATCTGGAAGGCCTCAACCAACGGGGTGATCAGTTTGCTATAAACATCAAGGAGAGATTGAAGTTAATTGTTGCAGGGGGTGATGGAACAGCAGGTTGGCTTCTTGGAGTTGTTTGTGATCTCAAATTATCTCATCCTCCACCAATAGCCACGGTGCCATTGGGCACAGGGAATAATCTACCTTTTGCGTTTGGTTGGGGGAAGAAGAACCCGGCAACAGATAAAGGATCAGTTGAGGCATTTTTAGATCAAGTGATGAAAgcaaaggaaatgaaaatagacaaCTGGCATATTCTTATGAGAATGAGAGCTCCTAAAGAAGGTTCCTGTGATCCAATTCCACCACTTGAGCTACCACATTCTTTGCATGCCTTCCATCGTGTATCTGAAGCCGATGAACTTAATATGGAAGGTTGCCACACGTTTCGTGGGGGATTTTGGAATTACTTCAGTATGGGAATGGATGCTCAAGTGTCTTACGCATTTCATTCAGAACGAAAGAAGAATcctgaaaaattcaaaaaccagTTGATTAATCAGACTACTTATGCTAAGCTTGGATGCACACAAGGATGGTTTTTTGCTTCTCTATCGCATCCTACTAACAGGAACATTGCACAACTagcaaaagtaaaatttatgaaaagacATGGTGAATGGCAAGACCTGAACATACCTCCCAgCATTCGGTCAATTGTATGTCTTAACTTGCCCAGCTTTTCTGGTGGACTGAATCCATGGGGTACACCAAACAGGAAGAAGCAGTGTGACGTAATTTTCATATACTAA 1026 0.4142 MASNFLNNFKIPDYILVPGSDVETVGHVPQCPVLVFVNSKSGGQLGGDLLKTYRTLLNPKQVVDLGEHAPDKILREVYANLEGLNQRGDQFAINIKERLKLIVAGGDGTAGWLLGVVCDLKLSHPPPIATVPLGTGNNLPFAFGWGKKNPATDKGSVEAFLDQVMKAKEMKIDNWHILMRMRAPKEGSCDPIPPLELPHSLHAFHRVSEADELNMEGCHTFRGGFWNYFSMGMDAQVSYAFHSERKKNPEKFKNQLINQTTYAKLGCTQGWFFASLSHPTNRNIAQLAKVKFMKRHGEWQDLNIPPSIRSIVCLNLPSFSGGLNPWGTPNRKKQCDVIFIY 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2186 341 Gene3D - 31 178 IPR017438 -
Ssu3g2186 341 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 28 181 IPR001206 GO:0016301
Ssu3g2186 341 Pfam Diacylglycerol kinase accessory domain 225 334 IPR000756 GO:0004143|GO:0007205
Ssu3g2186 341 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 30 329 IPR016064 -
Ssu3g2186 341 PANTHER DIACYLGLYCEROL KINASE 3 335 IPR037607 GO:0004143|GO:0007165
Ssu3g2186 341 Pfam Diacylglycerol kinase catalytic domain 32 158 IPR001206 GO:0016301
Ssu3g2186 341 PANTHER DIACYLGLYCEROL KINASE 3 335 - -
Ssu3g2186 341 SMART dagk_c4b_2 227 341 IPR000756 GO:0004143|GO:0007205
Ssu3g2186 341 SMART dagk_c4a_7 32 175 IPR001206 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2186 Ssu-Chr3 71011655 71017175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2186 3 336 Acyl Lipid Metabolism Gene Families AT2G20900 74.556 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2186 K00901 - gmx:100817198 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2186 3 71011655 71017175 Ssu3g2186 3 71011655 71017175 ECH
Ssu8g0863 8 14648448 14653943 Ssu3g2186 3 71011655 71017175 PCT