Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2175 atggctTACAACAAGGGGTTGCATAGCAGCAGTGGAGGGAGTCACAGAGGAAGGCCTTATGTGTTGATATTGCTTATCACATTTGGGGTTGCATTGCTTGGAGTGATGGTGCTTCACAAGCTCAGAGAGAGGCGCATCTATACCCTTCTTGTCAAAGAGAAAAGCCATCAGATAGTTGCCCTTCAGCTTCTCTTGCAGAAGGAAAAAGATCGCAGCAAAGAGTTGAGAGGGAAGAACGAAGAGATGAAGGGGAAGATATATGCCCTGAGAAGTCAGAAGATGGAGCTGGCTAGAACAGTTGTGGAGATGCAATCCACCCTGGATTCACTGAAAGATGAGCAGAAACTGATGGAATCAGCATTTGAGGAGCAGCAGAATGAGCTGAGGTTGATGCAAGAAAAGGGGAGCAATGTGGGACAAGGAGGCCCTGAAATAGTAGCATTAAGAGAGAATCTTAAGCATAAGGAAGCAGAGATAGAGGATTTTGAAATCCCTGTTAATGATCATCCAACCATCTTTCCTGAAATTGTGACAGCAAATGGAACAATGGCAGCACAAGATGAATCTGGGAAGGACGAAAATTCACGTGAATCTGCCAAAAATGAGAGTGATAACAATGAAGATGCAAGTAAAAGTGAATTAACCAAGTTCAAAGATGGGGATGTTGAAACTGAGATAAAAGATGAAATTCGGACTGATGGGGAGCTGGGAAACTCAAATGAAGACCCTCAAGATGACGGTGGTGGTGTGACAAAAGATATTGATGATGCTGAAGTGGTGGAtgggagagaaaagaaagcaaTAAAAGAAGAGCACGCAGGACAAGTTGAGAATAACACAGATGGTGTTGGTCAGGATTTTAAGGTGAAGCAATTGGCTGGGGTGAAGAGGAAACATGGCCATGCAAGTAGAACGAAGGGGAAACGGTGGAGAACCATTGTCAAGAATAGTATAATGAAGAACAATGGGGTTTTTGATAACCACATGGGCAATAGAAAGGTTTACAAAGATGAGTTGAAAGGTAGAGGAGTTGGGAAAGTCTCTGATGAGGAGAATTTTGCAAGAGAGGATGAGAGAAGGAACAATAATAGCCCAAGAAAAGGCAAGTCACAAGCCAAATTGCTAAAGCCTGAGAACCATGAAAACAAAGAAGATGCTAATGGTATGAAAGTGAATAATACCAATCACCAGATGACAAATAGTGGAACTAACATATACCCAGAGAAACAGAGACTGGATGAAATAAGGCAGTCAGAAGAGCAAGAACAGGGTCTTGTCCAACAAAACTGGAGCAAGAGGCATATCAACAAAGCTGACAAGAATGCAGGACAAACAAAATCCCAGGTGTTACTTGAAGGGCCAGAAGAATTAAAGGGGGATTTGGATGTACAAAAGCAAGAGAAAGAAGCCATTGACAGTGGCCATGACGGTGaggataatgatgatgatttcTTCAAGGAATCCCAATCTGAATTTGTAGACGAGAAGGATGAATACAAGGAAGAGATAGACGAGTCAGAATTTCAGCCtggtttgtaa 1539 0.412 MAYNKGLHSSSGGSHRGRPYVLILLITFGVALLGVMVLHKLRERRIYTLLVKEKSHQIVALQLLLQKEKDRSKELRGKNEEMKGKIYALRSQKMELARTVVEMQSTLDSLKDEQKLMESAFEEQQNELRLMQEKGSNVGQGGPEIVALRENLKHKEAEIEDFEIPVNDHPTIFPEIVTANGTMAAQDESGKDENSRESAKNESDNNEDASKSELTKFKDGDVETEIKDEIRTDGELGNSNEDPQDDGGGVTKDIDDAEVVDGREKKAIKEEHAGQVENNTDGVGQDFKVKQLAGVKRKHGHASRTKGKRWRTIVKNSIMKNNGVFDNHMGNRKVYKDELKGRGVGKVSDEENFAREDERRNNNSPRKGKSQAKLLKPENHENKEDANGMKVNNTNHQMTNSGTNIYPEKQRLDEIRQSEEQEQGLVQQNWSKRHINKADKNAGQTKSQVLLEGPEELKGDLDVQKQEKEAIDSGHDGEDNDDDFFKESQSEFVDEKDEYKEEIDESEFQPGL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2175 512 Coils Coil 65 85 - -
Ssu3g2175 512 MobiDBLite consensus disorder prediction 330 387 - -
Ssu3g2175 512 Coils Coil 93 134 - -
Ssu3g2175 512 PANTHER OS08G0177500 PROTEIN 1 508 - -
Ssu3g2175 512 MobiDBLite consensus disorder prediction 322 512 - -
Ssu3g2175 512 MobiDBLite consensus disorder prediction 184 257 - -
Ssu3g2175 512 MobiDBLite consensus disorder prediction 189 238 - -
Ssu3g2175 512 PANTHER OS08G0177500 PROTEIN 1 508 - -
Ssu3g2175 512 MobiDBLite consensus disorder prediction 388 407 - -
Ssu3g2175 512 MobiDBLite consensus disorder prediction 453 496 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2175 - - gmx:100791306 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2175 3 70836010 70838047 Ssu3g2175 3 70836010 70838047 ECH