Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2174 ATGAGGAAAAATGCTGGTTCTCAATCAGGAAGGATGTTTAGTGACAGGAAGTGGATTCTCCCCTTTTTTGCAagtttgattatatttatgagtctgTTTCTGACAGCTATTCTTGGCGTACTTAGTTCTGATGGCGGGGGAGAGCAGTCACCGTTTGAAATCATTTCCTTCAAGAGATCAGAGGATTCAGGTGGATATTTTGTGGAATCAGGTTTAGAAAGGTCTTTTAATGTTAGTGTGGTGAAAATGGAGGCACCAAGGTTTGCATATCTTATTTCAGGCACCAAGGGTGATAGTCATAGGATGATGAGGACGTTAGAGGCAGTGTATCACCCAAGGAATCAATACATCTTGCATTTAGATCTCGAGGCACCGCCCCGGGAAAGGTTGGAATTGGCAAATGCGGTGAAAGCTGATCCAATATTTCGTGAGGTGGAGAATGTGCGTGTTATGTCTCAATCCAATTTGGTAACTTATAAGGGTCCTACGATGATTGCTTGTACCCTCCAAGCTATTGCAGTATTATTGAAGGAAAGTTCAGAGTGGGACTGGTTTATAAACCTCAGTGCCTCAGATTATCCTCTTATGACACAGGATGATTTGTTTCATGTTTTCTCAAATCTGTCAAGAAATCTCAATTTCATTGAACATACACGCATTGCTGGTTGGAAACTGAACCAAAGAGCAAGACCCATCATTATTGACCCTGCACTTTACTTATCAAAGAAATCTGATTTAGCATTGACTACTCAACGAAGAACACTTCCCACATCTTTTAAACTGTTTACTGGTTCAGCTTGGGTTGTACTGACTCGGTCCTTTGTGGAGTACTGTATATGGGGATGGGATAACTTTCCACGGACTATGCTAATGTATTATACAAATTTCATTTCCTCACCAGAGGGATATTTTCACACTGTCATTTGTAACAAAGAGGAATTCCGTCATACTGCGATAAGCCATGATCTTCACTACATTGCTTGGGACAGTCCCCCAAAGCAGCATCCTATCTCTTTAACTATGAAGGACTTTGACAAAATGGTTAATAGCAAGGCGCCCTTTGCACGCAAGTTTGCAAAGGATGATCCAGTGCTTGACAAGATTGACAAAGAACTTTTGGGGCGCACACATAGATTTTCACCTGGGGCATGGTGTGGTGGGACCACAGATGGAGGGGCTGACCCTTGTTCTGTTCGTGGCAATGATACAATGTTTAGGTCAGGCCCTGGTGCTGAGAGGCTACGCGAGCTGCTTCAGGTGCTGTTATCTAAAGAATCTCTAAGCAAGCAGTGTTTGTGA 1299 0.4219 MRKNAGSQSGRMFSDRKWILPFFASLIIFMSLFLTAILGVLSSDGGGEQSPFEIISFKRSEDSGGYFVESGLERSFNVSVVKMEAPRFAYLISGTKGDSHRMMRTLEAVYHPRNQYILHLDLEAPPRERLELANAVKADPIFREVENVRVMSQSNLVTYKGPTMIACTLQAIAVLLKESSEWDWFINLSASDYPLMTQDDLFHVFSNLSRNLNFIEHTRIAGWKLNQRARPIIIDPALYLSKKSDLALTTQRRTLPTSFKLFTGSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFISSPEGYFHTVICNKEEFRHTAISHDLHYIAWDSPPKQHPISLTMKDFDKMVNSKAPFARKFAKDDPVLDKIDKELLGRTHRFSPGAWCGGTTDGGADPCSVRGNDTMFRSGPGAERLRELLQVLLSKESLSKQCL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2174 432 PANTHER BNACNNG43180D PROTEIN 10 425 - -
Ssu3g2174 432 Pfam Core-2/I-Branching enzyme 88 347 IPR003406 GO:0016020|GO:0016757
Ssu3g2174 432 PANTHER GLYCOSYLTRANSFERASE 10 425 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2174 Ssu-Chr3 70826624 70830269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2174 81 431 Glycosyltransferase AT1G03520 77.208 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2174 - - gmx:100816318 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2174 3 70826624 70830269 Ssu3g2174 3 70826624 70830269 ECH