Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2153 ATGTATGACCTGGTTCATGAAATCGTGGGTCTTTTGGATTCTTTAAACATCAGCAAGGCTGTCCTTGTTAGCAAGGACTTTGGTGCCTTCCCAGGATATCTTACAGCGGCAGTGCACCCAGAAAGAGTAGCTGCTATCATAAGTTTAGGCATTCCTTTCATGCTTCCTGGTCCCTCTGCATTGGAGAGCCACGTTCTTCTCCCCAAAGGATTTTATATTACTAGGTGGCGGGAGCCTGGGAGGGCAGAAGCAGATTTTGGCCGCTTTCCTGTGAAATCAGTGATAAGGAACATCTACACTCTTTTCTCTAGAAGTGAGATTCCAATAGCACCTGATGATCAAGAAATCATGGACTTGTTTGACCCGTCTACTCCCCTACCTCCATGGTTCTCTGAGGAAGACCTTGCAACCTATGCATCATCATATGAAAAATCTGGGTTCAGATATGCATTGCAGGTTCCTTACAGGAGTCTCAATGTTGAAACTGGCTCAAGTGACGTGAAGGTTACAGTTCCAGCACTTCTTATCATGGGTGAGAAAGATTATGTTATCAACTTTCCAGGCATGGAAGACAACATCCGAAGTGGGGCAGTGAAGAATTTTGTGCCGAACTTGGAAATCATTTATATTCCAGAAGGAAGTCATTTTGTGCATGAACAAATTCCGGAGAAGGTGAACCAGTTCATCATTGAGTTCCTTGACAAACAAAGTATCTGA 717 0.4393 MYDLVHEIVGLLDSLNISKAVLVSKDFGAFPGYLTAAVHPERVAAIISLGIPFMLPGPSALESHVLLPKGFYITRWREPGRAEADFGRFPVKSVIRNIYTLFSRSEIPIAPDDQEIMDLFDPSTPLPPWFSEEDLATYASSYEKSGFRYALQVPYRSLNVETGSSDVKVTVPALLIMGEKDYVINFPGMEDNIRSGAVKNFVPNLEIIYIPEGSHFVHEQIPEKVNQFIIEFLDKQSI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2153 238 Gene3D alpha/beta hydrolase 1 237 IPR029058 -
Ssu3g2153 238 SUPERFAMILY alpha/beta-Hydrolases 2 235 IPR029058 -
Ssu3g2153 238 PANTHER EPOXIDE HYDROLASE 1 236 - -
Ssu3g2153 238 PRINTS Epoxide hydrolase signature 36 49 IPR000639 GO:0003824
Ssu3g2153 238 PRINTS Epoxide hydrolase signature 210 232 IPR000639 GO:0003824
Ssu3g2153 238 PRINTS Epoxide hydrolase signature 171 187 IPR000639 GO:0003824
Ssu3g2153 238 PANTHER EPOXIDE HYDROLASE-LIKE PROTEIN 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2153 Ssu-Chr3 70241787 70271029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2153 4 237 Acyl Lipid Metabolism Gene Families AT3G51000 34.440 8.79e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2153 - - gmx:100802931 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2153 3 70241787 70271029 Ssu3g2153 3 70241787 70271029 ECH